Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G284500 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:70205967-70207624 (+) |
| Description | Similar to PIAL2: E4 SUMO-protein ligase PIAL2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026691 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 44 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g08910 |
Together with MOM1 and PIAL2, regulates transcriptional gene silencing (TGS) independently of changes in DNA methylation. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000082 | G1/S transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007059 | chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.906; coverage=19.378; evalue=6.17e-11; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007259 | cell surface receptor signaling pathway via JAK-STAT | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016925 | protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032480 | negative regulation of type I interferon production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033235 | positive regulation of protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042127 | regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060261 | positive regulation of transcription initiation by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060339 | negative regulation of type I interferon-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060966 | regulation of gene silencing by regulatory ncRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0065004 | protein-DNA complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904377 | positive regulation of protein localization to cell periphery | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905168 | positive regulation of double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990683 | DNA double-strand break attachment to nuclear envelope | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.906; coverage=19.378; evalue=6.17e-11; UniProt GO evidence=IGI:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005856 | cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034399 | nuclear periphery | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003690 | double-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.906; coverage=19.378; evalue=6.17e-11; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003712 | transcription coregulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016874 | ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019789 | SUMO transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019904 | protein domain specific binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061665 | SUMO ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140297 | DNA-binding transcription factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G08910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.959; coverage=67.459; evalue=1.12e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G41580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.537; coverage=66.362; evalue=4.67e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:406712 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.065; coverage=14.077; evalue=6.06e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:8554 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.364; coverage=20.11; evalue=4.44e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YOR156C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.906; coverage=19.378; evalue=6.17e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release |