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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G192150
Query referenceTK1151
LocationChr03:48355388-48359044 (-)
DescriptionSimilar to EME1B: Crossover junction endonuclease EME1B (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_007579 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 16 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g22140 Interacts with MUS81 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick.
Two distinct MUS81-EME1 complexes from Arabidopsis process Holliday junctions.2009 · DOI: 10.1104/pp.109.136846
At2g21800 Interacts with MUS81 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick.
Two distinct MUS81-EME1 complexes from Arabidopsis process Holliday junctions.2009 · DOI: 10.1104/pp.109.136846

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0648700 Interacts with MUS81 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000712resolution of meiotic recombination intermediatesBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006281DNA repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006302double-strand break repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006310DNA recombinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009411response to UVBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.613; coverage=49.708; evalue=1.52e-106; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009644response to high light intensityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.613; coverage=49.708; evalue=1.52e-106; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010332response to gamma radiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.613; coverage=49.708; evalue=1.52e-106; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031297replication fork processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031573mitotic intra-S DNA damage checkpoint signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051301cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048476Holliday junction resolvase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004519endonuclease activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016787hydrolase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G21800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.522; coverage=56.414; evalue=1.07e-139UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G22140KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.732; coverage=52.187; evalue=1.71e-146UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0648700KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.613; coverage=49.708; evalue=1.52e-106UniProtKB/Swiss-Prot DAT 2026 current_release