Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G163320 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:41420532-41423616 (-) |
| Description | Similar to YNL011C: Uncharacterized protein YNL011C (Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX%3D559292) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_027331 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 3 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g28290 |
Catalytic component of the chromatin structure-remodeling complex (RSC), which is involved in transcription regulation and nucleosome positioning. | No verified direct reference in this release |
At3g06010 |
Probable chromatin-remodeling factor that is functionally redundant with CHR23 in root and shoot stem cell initiation, and root apical meristem (RAM) and shoot apical meristem (SAM) maintenance. |
The SWI/SNF chromatin-remodeling gene AtCHR12 mediates temporary growth arrest in Arabidopsis thaliana upon perceiving environmental stress.2007 · DOI: 10.1111/j.1365-313x.2007.03185.x
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0008360 | regulation of cell shape | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.415; coverage=65.298; evalue=2.54e-14; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.415; coverage=65.298; evalue=2.54e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043743 | LPPG:FO 2-phospho-L-lactate transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.094; coverage=85.626; evalue=7.46e-65; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | bha:BH3568 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.415; coverage=65.298; evalue=2.54e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bsu:BSU34760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.915; coverage=72.895; evalue=5.31e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cac:CA_C0512 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.582; coverage=64.887; evalue=1.9e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | lmo:lmo2473 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.141; coverage=72.69; evalue=6.93e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YNL011C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.094; coverage=85.626; evalue=7.46e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release |