Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G010220 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:2521248-2527437 (-) |
| Description | Similar to APRF1: Protein ANTHESIS POMOTING FACTOR 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_006111 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 20 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g14530 |
Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus (By similarity). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001111 | RNA polymerase II promoter clearance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.534; coverage=96.904; evalue=6.15e-83; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006353 | DNA-templated transcription termination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032785 | negative regulation of DNA-templated transcription, elongation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048586 | regulation of long-day photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071027 | nuclear RNA surveillance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0110064 | lncRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140744 | negative regulation of lncRNA transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035097 | histone methyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.534; coverage=96.904; evalue=6.15e-83; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048188 | Set1C/COMPASS complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072357 | PTW/PP1 phosphatase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042800 | histone H3K4 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140993 | histone modifying activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G14530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.528; coverage=98.452; evalue=4.67e-179 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG17293 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.534; coverage=96.904; evalue=6.15e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:321614 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.514; coverage=96.285; evalue=1.04e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:735072 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.479; coverage=96.285; evalue=5.99e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:448141 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.836; coverage=96.285; evalue=4.5e-82 | UniProtKB/Swiss-Prot DAT 2026 current_release |