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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA02G525410
Query referenceTK1151
LocationChr02:135506022-135511604 (-)
DescriptionSimilar to TOP6B: DNA topoisomerase 6 subunit B (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_012978 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 17 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g20780 Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles.
A crucial role for the putative Arabidopsis topoisomerase VI in plant growth and development.2002 · DOI: 10.1073/pnas.152337599
DNA topoisomerase VI is essential for endoreduplication in Arabidopsis.2002 · DOI: 10.1016/s0960-9822(02)01198-3

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: B8BDQ4 Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. No verified direct reference in this release
Os09g0279600 Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000902cell morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006260DNA replicationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.473; coverage=68.787; evalue=8.98e-83; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006265DNA topological changeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007389pattern specification processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009741response to brassinosteroidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010026trichome differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042023DNA endoreduplicationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009330DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015935small ribosomal subunitCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003735structural constituent of ribosomeMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003918DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042803protein homodimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.582; coverage=96.006; evalue=0.0; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGape:APE_0706.1KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.473; coverage=68.787; evalue=8.98e-83UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G20780KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.85; coverage=98.373; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os09g0279600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=78.428; coverage=96.006; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4346606KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=78.428; coverage=96.006; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release