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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA02G520130
Query referenceTK1151
LocationChr02:134130308-134135295 (-)
DescriptionSimilar to REV: Homeobox-leucine zipper protein REVOLUTA (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_004496 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 13 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g60690 Probable transcription factor involved in the regulation of interfascicular fiber (cortical cells) and secondary xylem differentiation in the inflorescence stems.
IFL1, a gene regulating interfascicular fiber differentiation in Arabidopsis, encodes a homeodomain-leucine zipper protein.1999 · DOI: 10.1105/tpc.11.11.2139
Alteration of auxin polar transport in the Arabidopsis ifl1 mutants.2001 · DOI: 10.1104/pp.126.2.549
Amphivasal vascular bundle 1, a gain-of-function mutation of the IFL1/REV gene, is associated with alterations in the polarity of leaves, stems and carpels.2004 · DOI: 10.1093/pcp/pch051

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: A2Z8L4 Probable transcription factor. No verified direct reference in this release
Os10g0480200 Probable transcription factor. No verified direct reference in this release
Os03g0109400 Probable transcription factor. No verified direct reference in this release
UniProt: A2XBL9 Probable transcription factor. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009855determination of bilateral symmetryBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009944polarity specification of adaxial/abaxial axisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009956radial pattern formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010014meristem initiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010051xylem and phloem pattern formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010089xylem developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.156; coverage=99.408; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008289lipid bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G60690KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.974; coverage=100.592; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0640800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.156; coverage=99.408; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os10g0480200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.618; coverage=98.104; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release