Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G507640 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:130257438-130261404 (-) |
| Description | Similar to LSF1: Phosphoglucan phosphatase LSF1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_013287 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 60 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g01510 |
Starch granule-associated phosphoglucan phosphatase involved in the control of starch accumulation. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000045 | autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001558 | regulation of cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001932 | regulation of protein phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005977 | glycogen metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005978 | glycogen biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005982 | starch metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.545; coverage=37.415; evalue=1.31e-30; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005983 | starch catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.505; coverage=72.245; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006470 | protein dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006816 | calcium ion transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006914 | autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007005 | mitochondrion organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010629 | negative regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010923 | negative regulation of phosphatase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015813 | L-glutamate transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016055 | Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016239 | positive regulation of macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016311 | dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031396 | regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032007 | negative regulation of TOR signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033137 | negative regulation of peptidyl-serine phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035305 | negative regulation of dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035335 | peptidyl-tyrosine dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042306 | regulation of protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042325 | regulation of phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045786 | negative regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045859 | regulation of protein kinase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046835 | carbohydrate phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061136 | regulation of proteasomal protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903076 | regulation of protein localization to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904666 | regulation of ubiquitin protein ligase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000465 | regulation of glycogen (starch) synthase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.298; coverage=35.646; evalue=3.67e-29; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.545; coverage=37.415; evalue=1.31e-30; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009501 | amyloplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.298; coverage=35.646; evalue=3.67e-29; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.505; coverage=72.245; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009569 | chloroplast starch grain | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.505; coverage=72.245; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.505; coverage=72.245; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043036 | starch grain | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.505; coverage=72.245; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098554 | cytoplasmic side of endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098556 | cytoplasmic side of rough endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004373 | alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004721 | phosphoprotein phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.505; coverage=72.245; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004722 | protein serine/threonine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004725 | protein tyrosine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016791 | phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019203 | carbohydrate phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.505; coverage=72.245; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030246 | carbohydrate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030247 | polysaccharide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.545; coverage=37.415; evalue=1.31e-30; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046983 | protein dimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050308 | sugar-phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.227; coverage=23.946; evalue=5.45e-26; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001066 | amylopectin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.545; coverage=37.415; evalue=1.31e-30; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001069 | glycogen binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001070 | starch binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.545; coverage=37.415; evalue=1.31e-30; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G01510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.505; coverage=72.245; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G10940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.227; coverage=23.946; evalue=5.45e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G52180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.545; coverage=37.415; evalue=1.31e-30 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:114005 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.48; coverage=23.537; evalue=4.45e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |