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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA02G405980
Query referenceTK1151
LocationChr02:103170748-103174664 (-)
DescriptionSimilar to 3BETAHSD/D3: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_014664 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g43420 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3. No verified direct reference in this release
At2g26260 3beta-hydroxysteroid-dehydrogenase/decarboxylase involved in sterol synthesis.
Molecular and enzymatic characterizations of novel bifunctional 3beta-hydroxysteroid dehydrogenases/C-4 decarboxylases from Arabidopsis thaliana.2006 · DOI: 10.1074/jbc.m604431200
Overexpression of 3β-hydroxysteroid dehydrogenases/C-4 decarboxylases causes growth defects possibly due to abnormal auxin transport in Arabidopsis.2012 · DOI: 10.1007/s10059-012-0102-6
At1g47290 3beta-hydroxysteroid-dehydrogenase/decarboxylase involved in sterol synthesis.
Molecular and enzymatic characterizations of novel bifunctional 3beta-hydroxysteroid dehydrogenases/C-4 decarboxylases from Arabidopsis thaliana.2006 · DOI: 10.1074/jbc.m604431200
Overexpression of 3β-hydroxysteroid dehydrogenases/C-4 decarboxylases causes growth defects possibly due to abnormal auxin transport in Arabidopsis.2012 · DOI: 10.1007/s10059-012-0102-6

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006695cholesterol biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.552; coverage=62.981; evalue=8.74e-45; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007224smoothened signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.688; coverage=61.699; evalue=4.44e-44; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008203cholesterol metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.552; coverage=62.981; evalue=8.74e-45; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016126sterol biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.311; coverage=95.833; evalue=1.16e-155; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0033489cholesterol biosynthetic process via desmosterolBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.688; coverage=61.699; evalue=4.44e-44; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0033490cholesterol biosynthetic process via lathosterolBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.688; coverage=61.699; evalue=4.44e-44; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0036197zymosterol biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.688; coverage=61.699; evalue=4.44e-44; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060918auxin transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.315; coverage=92.468; evalue=1.96e-108; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0099402plant organ developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.315; coverage=92.468; evalue=1.96e-108; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.311; coverage=95.833; evalue=1.16e-155; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005789endoplasmic reticulum membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.311; coverage=95.833; evalue=1.16e-155; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005811lipid dropletCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.552; coverage=62.981; evalue=8.74e-45; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.311; coverage=95.833; evalue=1.16e-155; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.315; coverage=92.468; evalue=1.96e-108; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00002523-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.688; coverage=61.699; evalue=4.44e-44; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.311; coverage=95.833; evalue=1.16e-155; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:01021753-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.311; coverage=95.833; evalue=1.16e-155; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G47290KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.71; coverage=64.583; evalue=9.83e-88UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G26260KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.315; coverage=92.468; evalue=1.96e-108UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G43420KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.311; coverage=95.833; evalue=1.16e-155UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbta:616694KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.552; coverage=62.981; evalue=8.74e-45UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:309262KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.688; coverage=61.699; evalue=4.44e-44UniProtKB/Swiss-Prot DAT 2026 current_release