Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G105950 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:27742977-27744013 (-) |
| Description | Similar to PP2B15: F-box protein PP2-B15 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016746 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 6 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g09155 |
F-box protein PP2-B15. | No verified direct reference in this release |
At1g56240 |
F-box protein PP2-B13. | No verified direct reference in this release |
At1g56250 |
Component of SCF(VBF) E3 ubiquitin ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins such as VIP1 and Agrobacterium virE2, after their implication in T-DNA translocation to the host nucleus (can functionally replace Agrobacterium VirF). | No verified direct reference in this release |
At2g02240 |
F-box protein At2g02240. | No verified direct reference in this release |
At2g02360 |
Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009617 | response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.522; coverage=106.25; evalue=2.74e-60; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.706; coverage=100.0; evalue=2.97e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.182; coverage=101.103; evalue=3.61e-56; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.182; coverage=101.103; evalue=3.61e-56; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.683; coverage=102.206; evalue=6.01e-70; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030246 | carbohydrate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.683; coverage=102.206; evalue=6.01e-70; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09155 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.683; coverage=102.206; evalue=6.01e-70 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G56240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.522; coverage=106.25; evalue=2.74e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G56250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.319; coverage=105.882; evalue=3.53e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G02240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.706; coverage=100.0; evalue=2.97e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G02360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.182; coverage=101.103; evalue=3.61e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release |