Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G043090 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:10961262-10966386 (-) |
| Description | Similar to CSTF77: Cleavage stimulation factor subunit 77 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_023493 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 16 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g17760 |
One of the multiple factors required for polyadenylation and 3'-end cleavage of pre-mRNAs (By similarity). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009553 | embryo sac development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016441 | post-transcriptional gene silencing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031047 | regulatory ncRNA-mediated gene silencing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031123 | RNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031124 | mRNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031440 | regulation of mRNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=85.714; evalue=1.74e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042868 | antisense RNA metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0180010 | co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.273; coverage=60.44; evalue=1.21e-08; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.273; coverage=60.44; evalue=1.21e-08; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=85.714; evalue=1.74e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.273; coverage=60.44; evalue=1.21e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005848 | mRNA cleavage stimulating factor complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.273; coverage=60.44; evalue=1.21e-08; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.333; coverage=85.714; evalue=1.74e-07; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G17760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.025; coverage=86.813; evalue=1.87e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:1479 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.333; coverage=85.714; evalue=1.74e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:228410 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=85.714; evalue=1.74e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100174283 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=85.714; evalue=1.75e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.273; coverage=60.44; evalue=1.21e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |