Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G042650 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:10783947-10785183 (+) |
| Description | |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_007462 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 52 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g76710 |
Histone methyltransferase involved in regulation of flowering time. | |
At1g77300 |
Histone methyltransferase involved in di and tri-methylation of 'Lys-36' of histone H3 (H3K36me2 and H3K36me3). |
Prevention of early flowering by expression of FLOWERING LOCUS C requires methylation of histone H3 K36.2005 · DOI: 10.1038/ncb1329 Di- and tri- but not monomethylation on histone H3 lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana.2008 · DOI: 10.1128/mcb.01607-07 The ASH1 HOMOLOG 2 (ASHH2) histone H3 methyltransferase is required for ovule and anther development in Arabidopsis.2009 · DOI: 10.1371/journal.pone.0007817
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.026; coverage=87.97; evalue=2.2e-22; UniProt GO evidence=IGI:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007338 | single fertilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009553 | embryo sac development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009910 | negative regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010223 | secondary shoot formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010363 | regulation of plant-type hypersensitive response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016116 | carotenoid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030317 | flagellated sperm motility | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032259 | methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043067 | regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043409 | negative regulation of MAPK cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048653 | anther development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070201 | regulation of establishment of protein localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.026; coverage=87.97; evalue=2.2e-22; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090548 | response to nitrate starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001032 | regulation of double-strand break repair via nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.026; coverage=87.97; evalue=2.2e-22; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000775 | chromosome, centromeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005923 | bicellular tight junction | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032183 | SUMO binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042054 | histone methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042799 | histone H4K20 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042800 | histone H3K4 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046974 | histone H3K9 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046975 | histone H3K36 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140938 | histone H3 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140948 | histone H3K9 monomethyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140954 | histone H3K36 dimethyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140955 | histone H3K36 trimethyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140999 | histone H3K4 trimethyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G76710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.442; coverage=96.992; evalue=4.45e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G77300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.833; coverage=90.226; evalue=5.32e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:7468 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.857; coverage=89.474; evalue=9.09e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:107823 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.026; coverage=87.97; evalue=2.2e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:192195 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=72.18; evalue=5.66e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release |