Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA01G564400`
Query reference	TK1151
Location	Chr01:141940644-141943653 (-)
Description	Similar to RANGAP1: RAN GTPase-activating protein 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_001054 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 31 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g19320`	GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state.	No verified direct reference in this release
`At3g63130`	GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state.	Plant RanGAPs are localized at the nuclear envelope in interphase and associated with microtubules in mitotic cells.2002 · DOI: 10.1046/j.1365-313x.2002.01324.x RanGAP1 is a continuous marker of the Arabidopsis cell division plane.2008 · DOI: 10.1073/pnas.0806157105
`At1g47200`	Regulates the mitotic activity in roots.	Arabidopsis WPP-domain proteins are developmentally associated with the nuclear envelope and promote cell division.2004 · DOI: 10.1105/tpc.104.026740 WPP-domain proteins mimic the activity of the HSC70-1 chaperone in preventing mistargeting of RanGAP1-anchoring protein WIT1.2009 · DOI: 10.1104/pp.109.143404
`At5g43070`	Regulates the mitotic activity in roots.	Arabidopsis WPP-domain proteins are developmentally associated with the nuclear envelope and promote cell division.2004 · DOI: 10.1105/tpc.104.026740 WPP-domain proteins mimic the activity of the HSC70-1 chaperone in preventing mistargeting of RanGAP1-anchoring protein WIT1.2009 · DOI: 10.1104/pp.109.143404

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000911	cytokinesis by cell plate formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006606	protein import into nucleus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006913	nucleocytoplasmic transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.229; coverage=96.289; evalue=0.0; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007249	canonical NF-kappaB signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032687	negative regulation of interferon-alpha production	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032688	negative regulation of interferon-beta production	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032715	negative regulation of interleukin-6 production	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IDA:CACAO	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032720	negative regulation of tumor necrosis factor production	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IDA:CACAO	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043124	negative regulation of canonical NF-kappaB signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045824	negative regulation of innate immune response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048147	negative regulation of fibroblast proliferation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050680	negative regulation of epithelial cell proliferation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051898	negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080090	regulation of primary metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901223	negative regulation of non-canonical NF-kappaB signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000325	plant-type vacuole	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.229; coverage=96.289; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005635	nuclear envelope	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.229; coverage=96.289; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005819	spindle	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009504	cell plate	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009524	phragmoplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.229; coverage=96.289; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031965	nuclear membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032153	cell division site	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048471	perinuclear region of cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005096	GTPase activator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0036312	phosphatidylinositol 3-kinase regulatory subunit binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G63130	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.202; coverage=96.68; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G19320	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.229; coverage=96.289; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	hsa:197358	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.2; coverage=48.828; evalue=7.35e-20	UniProtKB/Swiss-Prot DAT 2026 current_release