Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G521270 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:130723178-130727849 (-) |
| Description | Similar to CHR25: Protein CHROMATIN REMODELING 25 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_001628 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 29 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g19210 |
Dissociates RAD51 from nucleoprotein filaments formed on dsDNA. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os02g0762800 |
Multifunctional ATPase that plays a role in homologous recombination (HR) which is a major pathway for repairing DNA double-strand breaks (DSBs), single-stranded DNA (ssDNA) gaps, and stalled or collapsed replication forks. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000711 | meiotic DNA repair synthesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.162; coverage=87.033; evalue=6.18e-178; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.469; coverage=70.33; evalue=4.37e-178; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.469; coverage=70.33; evalue=4.37e-178; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.162; coverage=87.033; evalue=6.18e-178; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010212 | response to ionizing radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.162; coverage=87.033; evalue=6.18e-178; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010332 | response to gamma radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043150 | DNA synthesis involved in double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.162; coverage=87.033; evalue=6.18e-178; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.469; coverage=70.33; evalue=4.37e-178; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051701 | biological process involved in interaction with host | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071248 | cellular response to metal ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071480 | cellular response to gamma radiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.469; coverage=70.33; evalue=4.37e-178; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.469; coverage=70.33; evalue=4.37e-178; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.469; coverage=70.33; evalue=4.37e-178; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008094 | ATP-dependent activity, acting on DNA | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.469; coverage=70.33; evalue=4.37e-178; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015616 | DNA translocase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.613; coverage=87.473; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036310 | ATP-dependent DNA/DNA annealing activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.479; coverage=70.22; evalue=2.18e-179; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.479; coverage=70.22; evalue=2.18e-179; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140658 | ATP-dependent chromatin remodeler activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.162; coverage=87.033; evalue=6.18e-178; UniProt GO evidence=IEA:EnsemblMetazoa | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G19210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.876; coverage=102.967; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0762800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.613; coverage=87.473; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dwi:6642593 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.162; coverage=87.033; evalue=6.18e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:424611 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.479; coverage=70.22; evalue=2.18e-179 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:8438 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.469; coverage=70.33; evalue=4.37e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release |