Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA01G403630`
Query reference	TK1151
Location	Chr01:100823414-100826601 (-)
Description	Similar to PAD4: Lipase-like PAD4 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_003017 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 39 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g52430`	Probable lipase required downstream of MPK4 for accumulation of the plant defense-potentiating molecule, salicylic acid, thus contributing to the plant innate immunity against invasive biotrophic pathogens and to defense mechanisms upon recognition of microbe- associated molecular patterns (MAMPs).	Arabidopsis thaliana PAD4 encodes a lipase-like gene that is important for salicylic acid signaling.1999 · DOI: 10.1073/pnas.96.23.13583 Arabidopsis thaliana EDS4 contributes to salicylic acid (SA)-dependent expression of defense responses: evidence for inhibition of jasmonic acid signaling by SA.2000 · DOI: 10.1094/mpmi.2000.13.5.503 Fumonisin B1-induced cell death in arabidopsis protoplasts requires jasmonate-, ethylene-, and salicylate-dependent signaling pathways.2000 · DOI: 10.1105/tpc.12.10.1823 Direct interaction between the Arabidopsis disease resistance signaling proteins, EDS1 and PAD4.2001 · DOI: 10.1093/emboj/20.19.5400 The disease resistance signaling components EDS1 and PAD4 are essential regulators of the cell death pathway controlled by LSD1 in Arabidopsis.2001 · DOI: 10.1105/tpc.010085 EDS5, an essential component of salicylic acid-dependent signaling for disease resistance in Arabidopsis, is a member of the MATE transporter family.2002 · DOI: 10.1105/tpc.010376 Arabidopsis RPP4 is a member of the RPP5 multigene family of TIR-NB-LRR genes and confers downy mildew resistance through multiple signalling components.2002 · DOI: 10.1046/j.0960-7412.2001.01229.x Genetic evidence that expression of NahG modifies defence pathways independent of salicylic acid biosynthesis in the Arabidopsis-Pseudomonas syringae pv. tomato interaction.2003 · DOI: 10.1046/j.1365-313x.2003.01881.x LESION SIMULATING DISEASE 1 is required for acclimation to conditions that promote excess excitation energy.2004 · DOI: 10.1104/pp.104.043646 A key role for ALD1 in activation of local and systemic defenses in Arabidopsis.2004 · DOI: 10.1111/j.1365-313x.2004.02200.x The atypical resistance gene, RPW8, recruits components of basal defence for powdery mildew resistance in Arabidopsis.2005 · DOI: 10.1111/j.1365-313x.2005.02356.x Arabidopsis SENESCENCE-ASSOCIATED GENE101 stabilizes and signals within an ENHANCED DISEASE SUSCEPTIBILITY1 complex in plant innate immunity.2005 · DOI: 10.1105/tpc.105.033910 Premature leaf senescence modulated by the Arabidopsis PHYTOALEXIN DEFICIENT4 gene is associated with defense against the phloem-feeding green peach aphid.2005 · DOI: 10.1104/pp.105.070433 Genetic analysis of developmentally regulated resistance to downy mildew (Hyaloperonospora parasitica) in Arabidopsis thaliana.2005 · DOI: 10.1094/mpmi-18-1226 Arabidopsis MAP kinase 4 regulates salicylic acid- and jasmonic acid/ethylene-dependent responses via EDS1 and PAD4.2006 · DOI: 10.1111/j.1365-313x.2006.02806.x Plastidial fatty acid levels regulate resistance gene-dependent defense signaling in Arabidopsis.2007 · DOI: 10.1073/pnas.0609259104 Phloem-based resistance to green peach aphid is controlled by Arabidopsis PHYTOALEXIN DEFICIENT4 without its signaling partner ENHANCED DISEASE SUSCEPTIBILITY1.2007 · DOI: 10.1111/j.1365-313x.2007.03241.x Lysigenous aerenchyma formation in Arabidopsis is controlled by LESION SIMULATING DISEASE1.2007 · DOI: 10.1105/tpc.106.048843 Arabidopsis proteins important for modulating defense responses to Pseudomonas syringae that secrete HopW1-1.2008 · DOI: 10.1111/j.1365-313x.2008.03439.x PAD4-dependent antibiosis contributes to the ssi2-conferred hyper-resistance to the green peach aphid.2010 · DOI: 10.1094/mpmi-23-5-0618 Different roles of Enhanced Disease Susceptibility1 (EDS1) bound to and dissociated from Phytoalexin Deficient4 (PAD4) in Arabidopsis immunity.2011 · DOI: 10.1111/j.1469-8137.2011.03675.x SAG101 forms a ternary complex with EDS1 and PAD4 and is required for resistance signaling against turnip crinkle virus.2011 · DOI: 10.1371/journal.ppat.1002318 Discrimination of Arabidopsis PAD4 activities in defense against green peach aphid and pathogens.2012 · DOI: 10.1104/pp.112.193417 Natural variation in small molecule-induced TIR-NB-LRR signaling induces root growth arrest via EDS1- and PAD4-complexed R protein VICTR in Arabidopsis.2012 · DOI: 10.1105/tpc.112.107235 Lesion simulating disease1, enhanced disease susceptibility1, and phytoalexin deficient4 conditionally regulate cellular signaling homeostasis, photosynthesis, water use efficiency, and seed yield in Arabidopsis.2013 · DOI: 10.1104/pp.112.208116 Isolation of Arabidopsis mutants with enhanced disease susceptibility by direct screening.1996 · DOI: 10.1093/genetics/143.2.973 Phytoalexin-deficient mutants of Arabidopsis reveal that PAD4 encodes a regulatory factor and that four PAD genes contribute to downy mildew resistance.1997 · DOI: 10.1093/genetics/146.1.381 PAD4 functions upstream from salicylic acid to control defense responses in Arabidopsis.1998 · DOI: 10.1105/tpc.10.6.1021 Correlation of defense gene induction defects with powdery mildew susceptibility in Arabidopsis enhanced disease susceptibility mutants.1998 · DOI: 10.1046/j.1365-313x.1998.00319.x

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000304	response to singlet oxygen	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.439; coverage=77.48; evalue=7.05e-41; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0001666	response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0002213	defense response to insect	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006629	lipid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.08; coverage=98.425; evalue=7.79e-44; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.978; coverage=77.638; evalue=4.5e-41; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009617	response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009625	response to insect	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009626	plant-type hypersensitive response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009627	systemic acquired resistance	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009751	response to salicylic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009873	ethylene-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010105	negative regulation of ethylene-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IGI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010150	leaf senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010225	response to UV-C	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010310	regulation of hydrogen peroxide metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010618	aerenchyma formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016042	lipid catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031348	negative regulation of defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050829	defense response to Gram-negative bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051707	response to other organism	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0060866	leaf abscission	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071327	cellular response to trehalose stimulus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080142	regulation of salicylic acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080151	positive regulation of salicylic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IGI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900367	positive regulation of defense response to insect	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900426	positive regulation of defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901183	positive regulation of camalexin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000022	regulation of jasmonic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IGI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000031	regulation of salicylic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IDA:ComplexPortal	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.439; coverage=77.48; evalue=7.05e-41; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016298	lipase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016740	transferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016787	hydrolase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.08; coverage=98.425; evalue=7.79e-44; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042803	protein homodimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.439; coverage=77.48; evalue=7.05e-41; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G48080	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.08; coverage=98.425; evalue=7.79e-44	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G48090	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.439; coverage=77.48; evalue=7.05e-41	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G52430	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.523; coverage=64.094; evalue=1.57e-88	UniProtKB/Swiss-Prot DAT 2026 current_release