Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G399810 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:99783881-99787315 (-) |
| Description | Similar to Exopolygalacturonase (Fragment) (Oenothera organensis OX%3D3945) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_001837 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 5 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g61730 |
Regulates tapetum degeneration and pollen maturation during anther development. | No verified direct reference in this release |
At5g36000 |
Probable F-box protein At5g36000. | No verified direct reference in this release |
At5g60600 |
Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. |
CHLOROPLAST BIOGENESIS genes act cell and noncell autonomously in early chloroplast development.2004 · DOI: 10.1104/pp.103.036996
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os02g0603800 |
Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0005975 | carbohydrate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.909; coverage=51.793; evalue=7.54e-127; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.909; coverage=51.793; evalue=7.54e-127; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.909; coverage=51.793; evalue=7.54e-127; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004650 | polygalacturonase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.909; coverage=51.793; evalue=7.54e-127; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047911 | galacturan 1,4-alpha-galacturonidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.909; coverage=51.793; evalue=7.54e-127; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G07850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.543; coverage=54.663; evalue=1.88e-125 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ghi:107942091 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.913; coverage=52.511; evalue=7.55e-124 | UniProtKB/Swiss-Prot DAT 2026 current_release |