Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G098920 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:25025248-25029207 (+) |
| Description | Similar to EGY1: Probable zinc metalloprotease EGY1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004889 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 23 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g35220 |
Membrane-associated and ATP-independent metalloprotease required for development of both thylakoid grana and well-organized lamellae in chloroplast. |
EGY1 encodes a membrane-associated and ATP-independent metalloprotease that is required for chloroplast development.2005 · DOI: 10.1111/j.1365-313x.2004.02308.x
|
At5g35210 |
Membrane-bound transcription factor required for the plastid-to-nucleus retrograde signaling. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0792400 |
Probable membrane-associated metalloprotease that may be involved in chloroplast development. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009630 | gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009959 | negative gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010019 | chloroplast-nucleus signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010027 | thylakoid membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010207 | photosystem II assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043157 | response to cation stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048564 | photosystem I assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060359 | response to ammonium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009707 | chloroplast outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031010 | ISWI-type complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031969 | chloroplast membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004222 | metalloendopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008237 | metallopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.155; coverage=67.714; evalue=7.47e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G35210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.212; coverage=28.796; evalue=1.61e-82 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G35220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.863; coverage=102.094; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0142100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.155; coverage=67.714; evalue=6.22e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0792400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.13; coverage=77.836; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |