Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G042580 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:10928014-10939673 (+) |
| Description | Similar to YAB1: Axial regulator YABBY 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026563 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 16 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g45190 |
Involved in the abaxial cell fate determination during embryogenesis and organogenesis. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: A2X7Q3 |
Protein YABBY 4. | No verified direct reference in this release |
Os02g0643200 |
Seems to be associated with phloem cell differentiation. | No verified direct reference in this release |
UniProt: Q01JG2 |
May be involved in leaf cell growth and differentiation, rather than abaxial cell fate determination. | No verified direct reference in this release |
Os04g0536300 |
May be involved in leaf cell growth and differentiation, rather than abaxial cell fate determination. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.919; coverage=79.211; evalue=2.78e-66; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009933 | meristem structural organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009944 | polarity specification of adaxial/abaxial axis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010093 | specification of floral organ identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010154 | fruit development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010158 | abaxial cell fate specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010450 | inflorescence meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045165 | cell fate commitment | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090706 | specification of plant organ position | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902183 | regulation of shoot apical meristem development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000024 | regulation of leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G45190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.87; coverage=77.419; evalue=1.1e-72 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G00180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.919; coverage=79.211; evalue=2.78e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0643200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.227; coverage=88.53; evalue=8.02e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0536300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.75; coverage=86.022; evalue=3.58e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release |