RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDLXL04_039093
Query referenceOH1004
LocationChr09:59182085-59184739 (+)
DescriptionSimilar to IP5P6: Type IV inositol polyphosphate 5-phosphatase 6 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_039093 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 22 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g05470 May have phosphatase activity toward PtdIns(4,5)P₂ and PtdIns(3,4,5)P₃.
Genetic regulation of vascular tissue patterning in Arabidopsis.1999 · DOI: 10.1105/tpc.11.11.2123
Cotyledon vascular pattern2-mediated inositol (1,4,5) triphosphate signal transduction is essential for closed venation patterns of Arabidopsis foliar organs.2004 · DOI: 10.1105/tpc.021030
CVP2- and CVL1-mediated phosphoinositide signaling as a regulator of the ARF GAP SFC/VAN3 in establishment of foliar vein patterns.2009 · DOI: 10.1111/j.1365-313x.2009.03920.x
Primary root protophloem differentiation requires balanced phosphatidylinositol-4,5-biphosphate levels and systemically affects root branching.2015 · DOI: 10.1242/dev.118364
At2g32010 Has phosphatase activity toward PtdIns(4,5)P₂ and, more weakly, PtdIns(3,4,5)P₃, but not Ins(1,4,5)P₃.
CVP2- and CVL1-mediated phosphoinositide signaling as a regulator of the ARF GAP SFC/VAN3 in establishment of foliar vein patterns.2009 · DOI: 10.1111/j.1365-313x.2009.03920.x
Primary root protophloem differentiation requires balanced phosphatidylinositol-4,5-biphosphate levels and systemically affects root branching.2015 · DOI: 10.1242/dev.118364
At3g63240 Type I inositol polyphosphate 5-phosphatase 4. No verified direct reference in this release
At5g65090 May be involved in the regulation of root hairs development.
Genetic interactions during root hair morphogenesis in Arabidopsis.2000 · DOI: 10.1105/tpc.12.10.1961
Analysis of the root-hair morphogenesis transcriptome reveals the molecular identity of six genes with roles in root-hair development in Arabidopsis.2006 · DOI: 10.1111/j.1365-313x.2005.02609.x
At5g04980 Type I inositol polyphosphate 5-phosphatase 10. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009737response to abscisic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009738abscisic acid-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009932cell tip growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.212; coverage=44.975; evalue=3.35e-105; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010051xylem and phloem pattern formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010053root epidermal cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.212; coverage=44.975; evalue=3.35e-105; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010067procambium histogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010305leaf vascular tissue pattern formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010588cotyledon vascular tissue pattern formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032957inositol trisphosphate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046856phosphatidylinositol dephosphorylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048765root hair cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.212; coverage=44.975; evalue=3.35e-105; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048766root hair initiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.212; coverage=44.975; evalue=3.35e-105; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071472cellular response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.115; coverage=98.682; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000377regulation of reactive oxygen species metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.115; coverage=98.682; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.115; coverage=98.682; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.115; coverage=98.682; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004439phosphatidylinositol-4,5-bisphosphate 5-phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004445inositol-polyphosphate 5-phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034485phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046030inositol trisphosphate phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G05470KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.169; coverage=103.13; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G32010KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.115; coverage=98.682; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G63240KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.046; coverage=100.824; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G65090KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.212; coverage=44.975; evalue=3.35e-105UniProtKB/Swiss-Prot DAT 2026 current_release