Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_036986 |
|---|---|
| Query reference | OH1004 |
| Location | Chr08:51252224-51259674 (-) |
| Description | Similar to VPS11: Vacuolar protein-sorting-associated protein 11 homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_036986 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 44 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g05170 |
Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006904 | vesicle docking involved in exocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007032 | endosome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007033 | vacuole organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008333 | endosome to lysosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.032; coverage=75.242; evalue=0.0; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031647 | regulation of protein stability | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=HMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032889 | regulation of vacuole fusion, non-autophagic | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.78; coverage=71.599; evalue=2.04e-62; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033147 | negative regulation of intracellular estrogen receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IGI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034058 | endosomal vesicle fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035542 | regulation of SNARE complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042144 | vacuole fusion, non-autophagic | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.032; coverage=75.242; evalue=0.0; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045732 | positive regulation of protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048284 | organelle fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061909 | autophagosome-lysosome fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099022 | vesicle tethering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.78; coverage=71.599; evalue=2.04e-62; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902115 | regulation of organelle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903955 | positive regulation of protein targeting to mitochondrion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=HMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000643 | positive regulation of early endosome to late endosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005764 | lysosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005774 | vacuolar membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.032; coverage=75.242; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005776 | autophagosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005884 | actin filament | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.628; coverage=71.004; evalue=0.0; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009705 | plant-type vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030136 | clathrin-coated vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030139 | endocytic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030897 | HOPS complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.78; coverage=71.599; evalue=2.04e-62; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031902 | late endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033263 | CORVET complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000166 | nucleotide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019904 | protein domain specific binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G05170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.581; coverage=70.335; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_R06F6.2 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.78; coverage=71.599; evalue=2.04e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0278141 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.032; coverage=75.242; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:55823 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.838; coverage=71.004; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:71732 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.628; coverage=71.004; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |