Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_036245`
Query reference	OH1004
Location	Chr08:38513894-38518409 (+)
Description	Similar to MIZ1: Protein MIZU-KUSSEI 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_036245 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g41660`	Plays a role in lateral root development by maintaining auxin levels.	A gene essential for hydrotropism in roots.2007 · DOI: 10.1073/pnas.0609929104 Hormonal regulation of lateral root development in Arabidopsis modulated by MIZ1 and requirement of GNOM activity for MIZ1 function.2011 · DOI: 10.1104/pp.111.186270 MIZ1, an essential protein for root hydrotropism, is associated with the cytoplasmic face of the endoplasmic reticulum membrane in Arabidopsis root cells.2012 · DOI: 10.1016/j.febslet.2012.01.008 Light and abscisic acid signalling are integrated by MIZ1 gene expression and regulate hydrotropic response in roots of Arabidopsis thaliana.2012 · DOI: 10.1111/j.1365-3040.2012.02493.x Overexpression of MIZU-KUSSEI1 enhances the root hydrotropic response by retaining cell viability under hydrostimulated conditions in Arabidopsis thaliana.2012 · DOI: 10.1093/pcp/pcs129
`At5g64860`	Chloroplastic alpha-glucanotransferase involved in maltotriose metabolism.	A critical role for disproportionating enzyme in starch breakdown is revealed by a knock-out mutation in Arabidopsis.2001 · DOI: 10.1046/j.1365-313x.2001.01012.x Blocking the metabolism of starch breakdown products in Arabidopsis leaves triggers chloroplast degradation.2009 · DOI: 10.1093/mp/ssp093

Rice

Reference gene ID	Possible function	Papers / DOI
`Os07g0627000`	Chloroplastic alpha-glucanotransferase involved in maltotriose metabolism.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000025	maltose catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.515; coverage=33.004; evalue=1.76e-27; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000272	polysaccharide catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.515; coverage=33.004; evalue=1.76e-27; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005983	starch catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.126; coverage=33.004; evalue=2.71e-23; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006006	glucose metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.126; coverage=33.004; evalue=2.71e-23; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009658	chloroplast organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010274	hydrotropism	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901020	negative regulation of calcium ion transmembrane transporter activity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009501	amyloplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.515; coverage=33.004; evalue=1.76e-27; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.515; coverage=33.004; evalue=1.76e-27; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032541	cortical endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004134	4-alpha-glucanotransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.515; coverage=33.004; evalue=1.76e-27; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019855	calcium channel inhibitor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G41660	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.097; coverage=44.664; evalue=3.65e-69	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G64860	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.126; coverage=33.004; evalue=2.71e-23	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os07g0627000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.323; coverage=33.004; evalue=3.13e-22	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	sot:102595076	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.515; coverage=33.004; evalue=1.76e-27	UniProtKB/Swiss-Prot DAT 2026 current_release