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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_035670
Query referenceOH1004
LocationChr08:26804524-26806413 (+)
DescriptionSimilar to PHR1: Protein PHOSPHATE STARVATION RESPONSE 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_035670 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g28610 Transcription factor involved in phosphate starvation signaling.
The Arabidopsis transcription factor PHR1 is essential for adaptation to high light and retaining functional photosynthesis during phosphate starvation.2012 · DOI: 10.1111/j.1399-3054.2011.01520.x
At5g29000 Transcription factor acting as central integrator of phosphate starvation responses.
A central regulatory system largely controls transcriptional activation and repression responses to phosphate starvation in Arabidopsis.2010 · DOI: 10.1371/journal.pgen.1001102
Arabidopsis ferritin 1 (AtFer1) gene regulation by the phosphate starvation response 1 (AtPHR1) transcription factor reveals a direct molecular link between iron and phosphate homeostasis.2013 · DOI: 10.1074/jbc.m113.482281
At3g04450 Myb family transcription factor PHL13. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: B8ANX9 Transcription factor involved in phosphate starvation signaling. No verified direct reference in this release
Os03g0329900 Transcription factor involved in phosphate starvation signaling.
OsPHR2 is involved in phosphate-starvation signaling and excessive phosphate accumulation in shoots of plants.2008 · DOI: 10.1104/pp.107.111443
Integrative Comparison of the Role of the PHOSPHATE RESPONSE1 Subfamily in Phosphate Signaling and Homeostasis in Rice.2015 · DOI: 10.1104/pp.15.00736

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007623circadian rhythmBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010468regulation of gene expressionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016036cellular response to phosphate starvationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034765regulation of monoatomic ion transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048364root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.432; coverage=93.719; evalue=7.93e-76; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0055063sulfate ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071486cellular response to high light intensityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901000regulation of response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.432; coverage=93.719; evalue=7.93e-76; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1903842response to arsenite ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G04450KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.551; coverage=69.347; evalue=1.91e-73UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G28610KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.495; coverage=74.623; evalue=8.56e-77UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G29000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.432; coverage=93.719; evalue=7.93e-76UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0329900KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.275; coverage=69.347; evalue=1.29e-69UniProtKB/Swiss-Prot DAT 2026 current_release