Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_035323`
Query reference	OH1004
Location	Chr08:20317816-20320040 (+)
Description	Similar to AHL6: AT-hook motif nuclear-localized protein 6 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_035323 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g62260`	Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).	No verified direct reference in this release
`At4g25320`	Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity).	Cell-to-cell movement of two interacting AT-hook factors in Arabidopsis root vascular tissue patterning.2013 · DOI: 10.1105/tpc.112.102210
`At4g12080`	Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).	Identification of a novel plant MAR DNA binding protein localized on chromosomal surfaces.2004 · DOI: 10.1007/s11103-004-3249-5
`At5g51590`	Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity).	Cell-to-cell movement of two interacting AT-hook factors in Arabidopsis root vascular tissue patterning.2013 · DOI: 10.1105/tpc.112.102210
`At4g22770`	Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).	No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.589; coverage=72.964; evalue=1.73e-80; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010051	xylem and phloem pattern formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.186; coverage=87.622; evalue=1.22e-78; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010089	xylem development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.186; coverage=87.622; evalue=1.22e-78; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.589; coverage=72.964; evalue=1.73e-80; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005654	nucleoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.054; coverage=72.638; evalue=2.43e-76; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005730	nucleolus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.054; coverage=72.638; evalue=2.43e-76; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.054; coverage=72.638; evalue=2.43e-76; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.054; coverage=72.638; evalue=2.43e-76; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0098687	chromosomal region	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.054; coverage=72.638; evalue=2.43e-76; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.054; coverage=72.638; evalue=2.43e-76; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003680	minor groove of adenine-thymine-rich DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.589; coverage=72.964; evalue=1.73e-80; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.589; coverage=72.964; evalue=1.73e-80; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.054; coverage=72.638; evalue=2.43e-76; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G12080	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.054; coverage=72.638; evalue=2.43e-76	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G22770	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.109; coverage=71.987; evalue=1.05e-62	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G25320	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.186; coverage=87.622; evalue=1.22e-78	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G51590	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.42; coverage=77.524; evalue=5.34e-66	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G62260	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.589; coverage=72.964; evalue=1.73e-80	UniProtKB/Swiss-Prot DAT 2026 current_release