Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_035317 |
|---|---|
| Query reference | OH1004 |
| Location | Chr08:20216433-20218374 (+) |
| Description | Similar to AHG1: Probable protein phosphatase 2C 75 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_035317 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g51760 |
Negative regulator of abscisic acid (ABA) responses during seed germination. | |
At2g29380 |
Probable protein phosphatase 2C 24. | No verified direct reference in this release |
At1g07430 |
Involved in the negative regulation of the K(+) potassium channel AKT1 by its dephosphorylation, antagonistically to CIPK proteins (e.g. CIPK23). | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os09g0325700 |
Involved in the regulation of abiotic stress responses. | |
Os01g0846300 |
Probable protein phosphatase 2C 9. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.737; coverage=86.26; evalue=3.13e-107; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.436; coverage=79.389; evalue=9.07e-84; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009939 | positive regulation of gibberellic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.172; coverage=82.952; evalue=2.22e-80; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010030 | positive regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.172; coverage=82.952; evalue=2.22e-80; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048838 | release of seed from dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.172; coverage=82.952; evalue=2.22e-80; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902039 | negative regulation of seed dormancy process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.172; coverage=82.952; evalue=2.22e-80; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902531 | regulation of intracellular signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.737; coverage=86.26; evalue=3.13e-107; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.436; coverage=79.389; evalue=9.07e-84; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.737; coverage=86.26; evalue=3.13e-107; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.885; coverage=77.608; evalue=1.19e-76; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.172; coverage=82.952; evalue=2.22e-80; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.172; coverage=82.952; evalue=2.22e-80; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=85.496; evalue=6.83e-72; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004722 | protein serine/threonine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.737; coverage=86.26; evalue=3.13e-107; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.737; coverage=86.26; evalue=3.13e-107; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G07430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.172; coverage=82.952; evalue=2.22e-80 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G29380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.436; coverage=79.389; evalue=9.07e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G51760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.737; coverage=86.26; evalue=3.13e-107 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0846300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.75; coverage=85.496; evalue=6.83e-72 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os09g0325700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.885; coverage=77.608; evalue=1.19e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4346736 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.885; coverage=77.608; evalue=1.19e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release |