Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_035084`
Query reference	OH1004
Location	Chr08:13863931-13864763 (-)
Description	Similar to DIVARICATA: Transcription factor DIVARICATA (Antirrhinum majus OX%3D4151)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_035084 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 31 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g08520`	Transcription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'.	Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.2015 · DOI: 10.1104/pp.15.00962

Rice

Reference gene ID	Possible function	Papers / DOI
`Os01g0524500`	Transcription activator that binds to 5'-TATCCA-3' elements in gene promoters.	Three novel MYB proteins with one DNA binding repeat mediate sugar and hormone regulation of alpha-amylase gene expression.2002 · DOI: 10.1105/tpc.001735 Convergent starvation signals and hormone crosstalk in regulating nutrient mobilization upon germination in cereals.2012 · DOI: 10.1105/tpc.112.097741
`UniProt: B8A9B2`	Transcription activator that binds to 5'-TATCCA-3' elements in gene promoters.	No verified direct reference in this release
`Os10g0561400`	Transcription repressor that binds to 5'-TATCCA-3' elements in gene promoters.	Three novel MYB proteins with one DNA binding repeat mediate sugar and hormone regulation of alpha-amylase gene expression.2002 · DOI: 10.1105/tpc.001735 A novel MYBS3-dependent pathway confers cold tolerance in rice.2010 · DOI: 10.1104/pp.110.153015

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.826; coverage=102.429; evalue=3.8e-66; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009414	response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009646	response to absence of light	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009723	response to ethylene	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009738	abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009739	response to gibberellin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009744	response to sucrose	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.951; coverage=82.996; evalue=4.44e-36; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009751	response to salicylic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009787	regulation of abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009908	flower development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.826; coverage=102.429; evalue=3.8e-66; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010116	positive regulation of abscisic acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010150	leaf senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045892	negative regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048262	determination of dorsal/ventral asymmetry	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.826; coverage=102.429; evalue=3.8e-66; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048527	lateral root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090697	post-embryonic plant organ morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140964	intracellular auxin homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IEA:EnsemblPlants	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901001	negative regulation of response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901371	regulation of leaf morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1905615	positive regulation of developmental vegetative growth	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.826; coverage=102.429; evalue=3.8e-66; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.951; coverage=82.996; evalue=4.44e-36; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.826; coverage=102.429; evalue=3.8e-66; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.568; coverage=29.96; evalue=2.68e-28; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042803	protein homodimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.951; coverage=82.996; evalue=4.44e-36; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G08520	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.103; coverage=78.947; evalue=3.01e-47	UniProtKB/Swiss-Prot DAT 2026 current_release