Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_033076 |
|---|---|
| Query reference | OH1004 |
| Location | Chr07:35475839-35477308 (+) |
| Description | Similar to DPB3: DNA polymerase epsilon subunit C (Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX%3D284592) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_033076 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g07980 |
Transcription factor which promotes the expression of heat stress-inducible genes by contributing to the formation of a heat stress-specific transcriptional complex with NF-Y subunits (e.g. NF-YA2 and NF-YB3) and DREB2A at the promoter of target genes, thus promoting heat tolerance. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006261 | DNA-templated DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.468; coverage=33.624; evalue=2.91e-08; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006275 | regulation of DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.967; coverage=39.738; evalue=1.16e-07; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006334 | nucleosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.967; coverage=39.738; evalue=1.16e-07; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006335 | DNA replication-dependent chromatin assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.789; coverage=33.188; evalue=1.45e-07; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.967; coverage=39.738; evalue=1.16e-07; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.789; coverage=33.188; evalue=1.45e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.789; coverage=33.188; evalue=1.45e-07; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140529 | CMG complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.789; coverage=33.188; evalue=1.45e-07; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902975 | mitotic DNA replication initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.789; coverage=33.188; evalue=1.45e-07; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902983 | DNA strand elongation involved in mitotic DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.789; coverage=33.188; evalue=1.45e-07; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005721 | pericentric heterochromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.967; coverage=39.738; evalue=1.16e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008622 | epsilon DNA polymerase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.967; coverage=39.738; evalue=1.16e-07; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008623 | CHRAC | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.468; coverage=33.624; evalue=2.91e-08; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043596 | nuclear replication fork | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.789; coverage=33.188; evalue=1.45e-07; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.967; coverage=39.738; evalue=1.16e-07; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003887 | DNA-directed DNA polymerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.967; coverage=39.738; evalue=1.16e-07; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031491 | nucleosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.789; coverage=33.188; evalue=1.45e-07; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G07980 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.056; coverage=38.865; evalue=6.75e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dha:DEHA2B06820g | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.468; coverage=33.624; evalue=2.91e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:54108 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.967; coverage=39.738; evalue=1.16e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:93696 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.967; coverage=39.738; evalue=2.46e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |