Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_032683 |
|---|---|
| Query reference | OH1004 |
| Location | Chr07:27777740-27780898 (-) |
| Description | Similar to DOT2: SART-1 family protein DOT2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_032683 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 44 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g16780 |
Plays a role in root, shoot and flower development. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000244 | spliceosomal tri-snRNP complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000387 | spliceosomal snRNP assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=TAS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000388 | spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000481 | maturation of 5S rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007064 | mitotic sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009933 | meristem structural organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010305 | leaf vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010588 | cotyledon vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034087 | establishment of mitotic sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045292 | mRNA cis splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048528 | post-embryonic root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048589 | developmental growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IGI:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060828 | regulation of canonical Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070050 | neuron cellular homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071169 | establishment of protein localization to chromatin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140588 | chromatin looping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990414 | replication-born double-strand break repair via sister chromatid exchange | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.992; coverage=31.704; evalue=3.72e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015030 | Cajal body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046540 | U4/U6 x U5 tri-snRNP complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071005 | U2-type precatalytic spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071011 | precatalytic spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.992; coverage=31.704; evalue=3.72e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071013 | catalytic step 2 spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071016 | U12-type precatalytic spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.992; coverage=31.704; evalue=3.72e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090694 | Scc2-Scc4 cohesin loading complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061775 | cohesin loader activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140587 | chromatin loop anchoring activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08; UniProt GO evidence=IGI:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G16780 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.229; coverage=100.501; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:794108 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.76; coverage=16.165; evalue=1.81e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:9092 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.566; coverage=23.684; evalue=1.5e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:20227 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.992; coverage=31.704; evalue=3.72e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:29678 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.566; coverage=23.684; evalue=4.16e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release |