Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_032201`
Query reference	OH1004
Location	Chr07:18553590-18556127 (-)
Description	Similar to NAP1%3B2: Nucleosome assembly protein 1%3B2 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032201 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g56950`	May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity).	Molecular and reverse genetic characterization of NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) genes unravels their function in transcription and nucleotide excision repair in Arabidopsis thaliana.2009 · DOI: 10.1111/j.1365-313x.2009.03844.x A truncated Arabidopsis NUCLEOSOME ASSEMBLY PROTEIN 1, AtNAP1;3T, alters plant growth responses to abscisic acid and salt in the Atnap1;3-2 mutant.2009 · DOI: 10.1093/mp/ssp026
`At2g19480`	May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity).	Molecular and reverse genetic characterization of NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) genes unravels their function in transcription and nucleotide excision repair in Arabidopsis thaliana.2009 · DOI: 10.1111/j.1365-313x.2009.03844.x

Rice

Reference gene ID	Possible function	Papers / DOI
`Os05g0539700`	May modulate chromatin structure by regulation of nucleosome assembly/disassembly.	No verified direct reference in this release
`UniProt: B8AW64`	May modulate chromatin structure by regulation of nucleosome assembly/disassembly.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000724	double-strand break repair via homologous recombination	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006281	DNA repair	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006334	nucleosome assembly	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009294	DNA-mediated transformation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016444	somatic cell DNA recombination	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000785	chromatin	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.837; coverage=80.739; evalue=1.66e-150; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.837; coverage=80.739; evalue=1.66e-150; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003682	chromatin binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042393	histone binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042802	identical protein binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=IPI:IntAct	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G19480	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.837; coverage=80.739; evalue=1.66e-150	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G56950	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os05g0539700	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	nta:107760768	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.094; coverage=101.319; evalue=3.28e-155	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4339460	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163	UniProtKB/Swiss-Prot DAT 2026 current_release