Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene ID	`LXL04_031283`
Query reference	OH1004
Location	Chr07:3992730-3993224 (+)
Description	Similar to CML44: Probable calcium-binding protein CML44 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_031283 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 9 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g21550`	Potential calcium sensor.	No verified direct reference in this release
`At4g20780`	Probable calcium sensor that binds calcium in vitro.	Calmodulin-like proteins from Arabidopsis and tomato are involved in host defense against Pseudomonas syringae pv. tomato.2005 · DOI: 10.1007/s11103-005-8395-x The calmodulin-related calcium sensor CML42 plays a role in trichome branching.2009 · DOI: 10.1074/jbc.m109.056770
`At5g44460`	Calcium-binding protein that may mediate calcium-dependent signal during plant defense response.	Calmodulin-like proteins from Arabidopsis and tomato are involved in host defense against Pseudomonas syringae pv. tomato.2005 · DOI: 10.1007/s11103-005-8395-x

Rice

Reference gene ID	Possible function	Papers / DOI
`Os04g0492800`	Potential calcium sensor.	No verified direct reference in this release
`Os12g0228800`	Potential calcium sensor.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0010091	trichome branching	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.037; coverage=98.78; evalue=3.28e-26; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051592	response to calcium ion	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.962; coverage=96.951; evalue=1.15e-21; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071456	cellular response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.506; coverage=93.902; evalue=5.92e-30; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.506; coverage=93.902; evalue=5.92e-30; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.962; coverage=96.951; evalue=1.15e-21; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.962; coverage=96.951; evalue=1.15e-21; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.037; coverage=98.78; evalue=3.28e-26; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005509	calcium ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.506; coverage=93.902; evalue=5.92e-30; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0061891	calcium ion sensor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.962; coverage=96.951; evalue=1.15e-21; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G21550	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.506; coverage=93.902; evalue=5.92e-30	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G20780	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.037; coverage=98.78; evalue=3.28e-26	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G44460	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.962; coverage=96.951; evalue=1.15e-21	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0492800	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.129; coverage=94.512; evalue=8.06e-25	UniProtKB/Swiss-Prot DAT 2026 current_release