Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_031160 |
|---|---|
| Query reference | OH1004 |
| Location | Chr07:1439356-1440508 (+) |
| Description | Similar to rps6: 40S ribosomal protein S6 (Asparagus officinalis OX%3D4686) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_031160 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 33 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g10360 |
Component of the 40S small ribosomal subunit (By similarity). | No verified direct reference in this release |
At4g31700 |
Component of the 40S small ribosomal subunit (By similarity). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000028 | ribosomal small subunit assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000082 | G1/S transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000278 | mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002181 | cytoplasmic translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006412 | translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.062; coverage=100.0; evalue=1.34e-168; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008284 | positive regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031929 | TOR signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032868 | response to insulin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042274 | ribosomal small subunit biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042593 | glucose homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071361 | cellular response to ethanol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903347 | negative regulation of bicellular tight junction assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.562; coverage=99.588; evalue=2.01e-162; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=92.593; coverage=100.0; evalue=1.19e-154; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=92.593; coverage=100.0; evalue=1.19e-154; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005840 | ribosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.062; coverage=100.0; evalue=1.34e-168; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.562; coverage=99.588; evalue=2.01e-162; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.562; coverage=99.588; evalue=2.01e-162; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015935 | small ribosomal subunit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022626 | cytosolic ribosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.562; coverage=99.588; evalue=2.01e-162; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022627 | cytosolic small ribosomal subunit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.562; coverage=99.588; evalue=2.01e-162; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032040 | small-subunit processome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036464 | cytoplasmic ribonucleoprotein granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044297 | cell body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.062; coverage=100.0; evalue=1.34e-168; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.562; coverage=99.588; evalue=2.01e-162; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003735 | structural constituent of ribosome | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=95.062; coverage=100.0; evalue=1.34e-168; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G31700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=92.593; coverage=100.0; evalue=1.19e-154 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G10360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.562; coverage=99.588; evalue=2.01e-162 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:29304 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.25; coverage=98.765; evalue=4.17e-104 | UniProtKB/Swiss-Prot DAT 2026 current_release |