RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDLXL04_031149
Query referenceOH1004
LocationChr07:1316302-1321288 (+)
DescriptionSimilar to ZYP1A: Synaptonemal complex protein 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_031149 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 11 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g22260 Required for chromosome synapsis and normal fidelity of crossing over. No verified direct reference in this release
At1g22275 Required for chromosome synapsis and normal fidelity of crossing over. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0452500 Required for chromosome synapsis and regulates crossover frequency during meiosis.
The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice.2010 · DOI: 10.1105/tpc.109.070789

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0007129homologous chromosome pairing at meiosisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007131reciprocal meiotic recombinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051301cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051878lateral element assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000795synaptonemal complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000802transverse filamentCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.711; coverage=104.306; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005694chromosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.711; coverage=104.306; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060090molecular adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G22260KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.327; coverage=105.144; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G22275KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.685; coverage=103.349; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0452500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.711; coverage=104.306; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release