Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_030678 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:120627468-120628421 (+) |
| Description | Similar to SYT4: Synaptotagmin-4 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_030678 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 26 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g11100 |
May be involved in membrane trafficking. | No verified direct reference in this release |
At1g09070 |
May act as an activator of the calcium-dependent activation of RBOHF that mediates reactive oxygen species (ROS) production and may play a role in cold responses. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006623 | protein targeting to vacuole | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.353; coverage=32.177; evalue=3.52e-08; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006869 | lipid transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.24; coverage=88.013; evalue=2.02e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.353; coverage=32.177; evalue=3.52e-08; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017158 | regulation of calcium ion-dependent exocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031340 | positive regulation of vesicle fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033299 | secretion of lysosomal enzymes | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061025 | membrane fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071456 | cellular response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.353; coverage=32.177; evalue=3.52e-08; UniProt GO evidence=HEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000326 | protein storage vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.353; coverage=32.177; evalue=3.52e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.353; coverage=32.177; evalue=3.52e-08; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.24; coverage=88.013; evalue=2.02e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.353; coverage=32.177; evalue=3.52e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.24; coverage=88.013; evalue=2.02e-13; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=ISM:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031045 | dense core granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032586 | protein storage vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.353; coverage=32.177; evalue=3.52e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070382 | exocytic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000149 | SNARE binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IPI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001786 | phosphatidylserine binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005509 | calcium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005544 | calcium-dependent phospholipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.24; coverage=88.013; evalue=2.02e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.24; coverage=88.013; evalue=2.02e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061891 | calcium ion sensor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.353; coverage=32.177; evalue=3.52e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G11100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.24; coverage=88.013; evalue=2.02e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG3139 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.207; coverage=76.341; evalue=2.25e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |