Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_030206`
Query reference	OH1004
Location	Chr06:110745237-110753209 (+)
Description	Similar to HAP2: Protein HAPLESS 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_030206 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g11720`	Required for male fertility.	Arabidopsis HAP2 (GCS1) is a sperm-specific gene required for pollen tube guidance and fertilization.2006 · DOI: 10.1242/dev.02683 HAP2(GCS1)-dependent gamete fusion requires a positively charged carboxy-terminal domain.2010 · DOI: 10.1371/journal.pgen.1000882 The functional domain of GCS1-based gamete fusion resides in the amino terminus in plant and parasite species.2010 · DOI: 10.1371/journal.pone.0015957 Egg cell-secreted EC1 triggers sperm cell activation during double fertilization.2012 · DOI: 10.1126/science.1223944 Arabidopsis HAP2/GCS1 is a gamete fusion protein homologous to somatic and viral fusogens.2017 · DOI: 10.1083/jcb.201610093

Rice

Reference gene ID	Possible function	Papers / DOI
`Os05g0269500`	Required for male fertility.	No verified direct reference in this release
`Os09g0525700`	Required for male fertility.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002943	tRNA dihydrouridine synthesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009567	double fertilization forming a zygote and endosperm	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010183	pollen tube guidance	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045026	plasma membrane fusion	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048235	pollen sperm cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0061936	fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140374	antiviral innate immune response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005576	extracellular region	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=HTP:FlyBase	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IDA:HPA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000049	tRNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003725	double-stranded RNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004860	protein kinase inhibitor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008289	lipid binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010181	FMN binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0017150	tRNA dihydrouridine synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050660	flavin adenine dinucleotide binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0070402	NADPH binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0102264	tRNA-dihydrouridine20 synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G11720	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.411; coverage=34.379; evalue=3.27e-94	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os05g0269500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=48.571; coverage=34.95; evalue=2.85e-61	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os09g0525700	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.378; coverage=33.951; evalue=1.36e-51	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	hsa:54920	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.182; coverage=7.846; evalue=8.53e-08	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	mmu:66369	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.364; coverage=7.846; evalue=4.84e-07	UniProtKB/Swiss-Prot DAT 2026 current_release