Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_030169 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:109910937-109913531 (-) |
| Description | Similar to RPA1A: Replication protein A 70 kDa DNA-binding subunit A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_030169 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 37 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g06510 |
Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. | |
At5g08020 |
Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os02g0776800 |
Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006260 | DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006261 | DNA-templated DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006284 | base-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006289 | nucleotide-excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006298 | mismatch repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007004 | telomere maintenance via telomerase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.831; coverage=88.485; evalue=3.06e-08; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007140 | male meiotic nuclear division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007141 | male meiosis I | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.831; coverage=88.485; evalue=3.06e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=21.769; coverage=89.091; evalue=1.27e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034502 | protein localization to chromosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048232 | male gamete generation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.831; coverage=88.485; evalue=3.06e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051026 | chiasma assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.831; coverage=88.485; evalue=3.06e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990166 | protein localization to site of double-strand break | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=HDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.831; coverage=88.485; evalue=3.06e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000800 | lateral element | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001673 | male germ cell nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.831; coverage=88.485; evalue=3.06e-08; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005662 | DNA replication factor A complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090734 | site of DNA damage | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003684 | damaged DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043047 | single-stranded telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098505 | G-rich strand telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140463 | chromatin-protein adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G06510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=22.831; coverage=88.485; evalue=3.06e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G08020 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=21.769; coverage=89.091; evalue=1.27e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0776800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=21.652; coverage=70.909; evalue=7.67e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:6117 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.6; coverage=50.505; evalue=1.62e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100173266 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.6; coverage=50.505; evalue=2.03e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |