Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_030152 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:109545485-109546537 (+) |
| Description | Similar to At4g40080: Putative clathrin assembly protein At4g40080 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_030152 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 16 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g40080 |
Putative clathrin assembly protein At4g40080. | No verified direct reference in this release |
At5g10410 |
Putative clathrin assembly protein At5g10410. | No verified direct reference in this release |
At5g65370 |
Putative clathrin assembly protein At5g65370. | No verified direct reference in this release |
At5g35200 |
Putative clathrin assembly protein At5g35200. | No verified direct reference in this release |
At4g02650 |
Putative clathrin assembly protein At4g02650. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006900 | vesicle budding from membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009860 | pollen tube growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.673; coverage=45.429; evalue=4.44e-09; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048268 | clathrin coat assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072583 | clathrin-dependent endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072659 | protein localization to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.673; coverage=45.429; evalue=4.44e-09; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.673; coverage=45.429; evalue=4.44e-09; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005905 | clathrin-coated pit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030136 | clathrin-coated vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090404 | pollen tube tip | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.673; coverage=45.429; evalue=4.44e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090406 | pollen tube | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.673; coverage=45.429; evalue=4.44e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000149 | SNARE binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005545 | 1-phosphatidylinositol binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032050 | clathrin heavy chain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G02650 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.673; coverage=45.429; evalue=4.44e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G40080 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.774; coverage=88.571; evalue=2.65e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G10410 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.169; coverage=88.0; evalue=1.68e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G35200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.592; coverage=81.143; evalue=1.46e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G65370 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.0; coverage=85.714; evalue=5.45e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release |