Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029745 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:99001525-99004005 (-) |
| Description | Similar to PVA12: Vesicle-associated protein 1-2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029745 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g60600 |
Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane. | No verified direct reference in this release |
At2g45140 |
Vesicle-associated protein that binds the oxysterol-binding protein ORP3A and allows its targeting to the ER. | |
At4g00170 |
May play a role in vesicle trafficking. | No verified direct reference in this release |
At5g47180 |
May play a role in vesicle trafficking. | No verified direct reference in this release |
At2g23830 |
May play a role in vesicle trafficking. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006605 | protein targeting | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061817 | endoplasmic reticulum-plasma membrane tethering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090158 | endoplasmic reticulum membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000326 | protein storage vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.57; coverage=101.255; evalue=2.6e-85; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005776 | autophagosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.57; coverage=101.255; evalue=2.6e-85; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.277; coverage=98.326; evalue=2.24e-59; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032586 | protein storage vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.57; coverage=101.255; evalue=2.6e-85; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043495 | protein-membrane adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G23830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.376; coverage=62.343; evalue=6.84e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G45140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=100.418; evalue=2e-85 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G60600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.57; coverage=101.255; evalue=2.6e-85 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G00170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.046; coverage=100.0; evalue=6.88e-71 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G47180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.277; coverage=98.326; evalue=2.24e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release |