Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029660 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:96635756-96636085 (+) |
| Description | |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029660 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 28 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g32530 |
MND1-interacting protein 1. | No verified direct reference in this release |
At1g03365 |
Putative E3 ubiquitin-protein ligase RF4. | No verified direct reference in this release |
At4g03000 |
Putative E3 ubiquitin-protein ligase RF298. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0007166 | cell surface receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007249 | canonical NF-kappaB signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.849; coverage=97.248; evalue=3.24e-13; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031398 | positive regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033209 | tumor necrosis factor-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034121 | regulation of toll-like receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0038061 | non-canonical NF-kappaB signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039535 | regulation of RIG-I signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045088 | regulation of innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051726 | regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060544 | regulation of necroptotic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060546 | negative regulation of necroptotic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070424 | regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097009 | energy homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.462; coverage=47.706; evalue=4.88e-07; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.849; coverage=97.248; evalue=3.24e-13; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.31; coverage=118.349; evalue=7.95e-20; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.462; coverage=47.706; evalue=4.88e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.31; coverage=118.349; evalue=7.95e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016740 | transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=EXP:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.849; coverage=97.248; evalue=3.24e-13; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G03365 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=35.849; coverage=97.248; evalue=3.24e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G32530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.31; coverage=118.349; evalue=7.95e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G03000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.921; coverage=116.514; evalue=1.78e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:330 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.176; coverage=46.789; evalue=3.25e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:240396 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.462; coverage=47.706; evalue=4.88e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |