Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_029280`
Query reference	OH1004
Location	Chr06:86018427-86021297 (-)
Description	Similar to CRCK2: Calmodulin-binding receptor-like cytoplasmic kinase 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_029280 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 33 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g49730`	Probable receptor-like protein kinase At1g49730.	No verified direct reference in this release
`At4g00330`	Calmodulin-binding receptor-like cytoplasmic kinase 2.	No verified direct reference in this release
`At5g18610`	May act as a receptor-like cytoplasmic kinase in chitin-induced immune signaling.	Selective regulation of the chitin-induced defense response by the Arabidopsis receptor-like cytoplasmic kinase PBL27.2014 · DOI: 10.1111/tpj.12535 The Arabidopsis CERK1-associated kinase PBL27 connects chitin perception to MAPK activation.2016 · DOI: 10.15252/embj.201694248
`At2g30740`	Receptor-like cytoplasmic kinase (RLCK) that triggers abscisic acid (ABA) signaling in response to dehydration by phosphorylating and activating ABA receptors to support their monomerization and enhance their ABA binding affinity; they in turn repress PP2C protein phosphatases acting as negative regulators of ABA responses (By similarity).	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os04g0540900`	Acts probably as a dual specificity protein kinase (Probable).	The Receptor-Like Cytoplasmic Kinase STRK1 Phosphorylates and Activates CatC, Thereby Regulating H2O2 Homeostasis and Improving Salt Tolerance in Rice.2018 · DOI: 10.1105/tpc.17.01000 The zinc finger protein DHHC09 S-acylates the kinase STRK1 to regulate H2O2 homeostasis and promote salt tolerance in rice.2024 · DOI: 10.1093/plcell/koae001

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.144; coverage=84.104; evalue=3.94e-53; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006979	response to oxidative stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007165	signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.808; coverage=97.977; evalue=8.35e-56; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009409	response to cold	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009414	response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009555	pollen development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.908; coverage=84.682; evalue=2.77e-55; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010310	regulation of hydrogen peroxide metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043410	positive regulation of MAPK cascade	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.064; coverage=90.173; evalue=1.13e-53; UniProt GO evidence=IMP:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045087	innate immune response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.064; coverage=90.173; evalue=1.13e-53; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045088	regulation of innate immune response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.064; coverage=90.173; evalue=1.13e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.064; coverage=90.173; evalue=1.13e-53; UniProt GO evidence=IDA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071323	cellular response to chitin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.064; coverage=90.173; evalue=1.13e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900150	regulation of defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.064; coverage=90.173; evalue=1.13e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900426	positive regulation of defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.064; coverage=90.173; evalue=1.13e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901000	regulation of response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1902074	response to salt	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1902882	regulation of response to oxidative stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005576	extracellular region	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.808; coverage=97.977; evalue=8.35e-56; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.144; coverage=84.104; evalue=3.94e-53; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005777	peroxisome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.144; coverage=84.104; evalue=3.94e-53; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.908; coverage=84.682; evalue=2.77e-55; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.808; coverage=97.977; evalue=8.35e-56; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009506	plasmodesma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.144; coverage=84.104; evalue=3.94e-53; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.908; coverage=84.682; evalue=2.77e-55; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004672	protein kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.808; coverage=97.977; evalue=8.35e-56; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004674	protein serine/threonine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.808; coverage=97.977; evalue=8.35e-56; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004712	protein serine/threonine/tyrosine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004713	protein tyrosine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.144; coverage=84.104; evalue=3.94e-53; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.808; coverage=97.977; evalue=8.35e-56; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019901	protein kinase binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.144; coverage=84.104; evalue=3.94e-53; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.144; coverage=84.104; evalue=3.94e-53; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0106310	protein serine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.808; coverage=97.977; evalue=8.35e-56; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G49730	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.808; coverage=97.977; evalue=8.35e-56	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G30740	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.144; coverage=84.104; evalue=3.94e-53	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G00330	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.908; coverage=84.682; evalue=2.77e-55	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G18610	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.064; coverage=90.173; evalue=1.13e-53	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0540900	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4336539	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.333; coverage=86.705; evalue=4.39e-53	UniProtKB/Swiss-Prot DAT 2026 current_release