Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_028989`
Query reference	OH1004
Location	Chr06:77107163-77109311 (+)
Description	Similar to XXT1: Xyloglucan 6-xylosyltransferase 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_028989 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 16 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g62720`	Xylosyltransferase specific to UDP-D-xylose that accepts both cellopentaose and cellohexaose as substrates, with a better use of cellohexaose, to produce xyloglucan.	Disrupting two Arabidopsis thaliana xylosyltransferase genes results in plants deficient in xyloglucan, a major primary cell wall component.2008 · DOI: 10.1105/tpc.108.059873 Structure of xyloglucan xylosyltransferase 1 reveals simple steric rules that define biological patterns of xyloglucan polymers.2018 · DOI: 10.1073/pnas.1801105115
`At4g02500`	Xylosyltransferase specific to UDP-D-xylose that accepts both cellopentaose and cellohexaose as substrates, with a better use of cellohexaose, to produce xyloglucan.	Disrupting two Arabidopsis thaliana xylosyltransferase genes results in plants deficient in xyloglucan, a major primary cell wall component.2008 · DOI: 10.1105/tpc.108.059873 Protein-protein interactions among xyloglucan-synthesizing enzymes and formation of Golgi-localized multiprotein complexes.2015 · DOI: 10.1093/pcp/pcu161
`At1g74380`	Probable xyloglucan xylosyltransferase involved in the biosynthesis of xyloglucan in roots.	Arabidopsis XXT5 gene encodes a putative alpha-1,6-xylosyltransferase that is involved in xyloglucan biosynthesis.2008 · DOI: 10.1111/j.1365-313x.2008.03580.x Protein-protein interactions among xyloglucan-synthesizing enzymes and formation of Golgi-localized multiprotein complexes.2015 · DOI: 10.1093/pcp/pcu161

Rice

Reference gene ID	Possible function	Papers / DOI
`Os03g0300000`	Probable xyloglucan xylosyltransferase involved in the biosynthesis of xyloglucan in roots.	Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa.2014 · DOI: 10.1093/jxb/eru189
`UniProt: A2XFP3`	Probable xyloglucan xylosyltransferase involved in the biosynthesis of xyloglucan in roots.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000271	polysaccharide biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009969	xyloglucan biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010411	xyloglucan metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048767	root hair elongation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=72.062; coverage=90.562; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000138	Golgi trans cisterna	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.948; coverage=91.968; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000139	Golgi membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005768	endosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005794	Golgi apparatus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005797	Golgi medial cisterna	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005802	trans-Golgi network	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016758	hexosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0033843	xyloglucan 6-xylosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035252	UDP-xylosyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042803	protein homodimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.948; coverage=91.968; evalue=0.0; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G74380	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.837; coverage=86.345; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G62720	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.632; coverage=91.566; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G02500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.948; coverage=91.968; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os03g0300000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=72.062; coverage=90.562; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release