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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_028633
Query referenceOH1004
LocationChr06:50500997-50504425 (-)
DescriptionSimilar to SUN1: SUN domain-containing protein 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_028633 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g04990 Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments.
Dynamics of Arabidopsis SUN proteins during mitosis and their involvement in nuclear shaping.2011 · DOI: 10.1111/j.1365-313x.2011.04523.x
Absence of SUN1 and SUN2 proteins in Arabidopsis thaliana leads to a delay in meiotic progression and defects in synapsis and recombination.2015 · DOI: 10.1111/tpj.12730
Plant nuclear shape is independently determined by the SUN-WIP-WIT2-myosin XI-i complex and CRWN1.2015 · DOI: 10.1080/19491034.2014.1003512
At3g10730 Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments.
Dynamics of Arabidopsis SUN proteins during mitosis and their involvement in nuclear shaping.2011 · DOI: 10.1111/j.1365-313x.2011.04523.x
Absence of SUN1 and SUN2 proteins in Arabidopsis thaliana leads to a delay in meiotic progression and defects in synapsis and recombination.2015 · DOI: 10.1111/tpj.12730
Plant nuclear shape is independently determined by the SUN-WIP-WIT2-myosin XI-i complex and CRWN1.2015 · DOI: 10.1080/19491034.2014.1003512

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006997nucleus organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051260protein homooligomerizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051291protein heterooligomerizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070197meiotic attachment of telomere to nuclear envelopeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090435protein localization to nuclear envelopeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000769regulation of establishment or maintenance of cell polarity regulating cell shapeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005635nuclear envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005637nuclear inner membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005789endoplasmic reticulum membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005819spindleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.888; coverage=78.912; evalue=1.15e-96; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009524phragmoplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043495protein-membrane adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G10730KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.888; coverage=78.912; evalue=1.15e-96UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G04990KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.103; coverage=78.912; evalue=6.67e-111UniProtKB/Swiss-Prot DAT 2026 current_release