Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_027333 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:13749241-13756697 (-) |
| Description | Similar to ATG7: Ubiquitin-like modifier-activating enzyme atg7 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_027333 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 67 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g45900 |
E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. |
The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana.2002 · DOI: 10.1074/jbc.m204630200
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000045 | autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000422 | autophagy of mitochondrion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000423 | mitophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006497 | protein lipidation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006914 | autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006995 | cellular response to nitrogen starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007005 | mitochondrion organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.02; coverage=63.529; evalue=1.5e-179; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008283 | cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009267 | cellular response to starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009749 | response to glucose | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.02; coverage=63.529; evalue=1.5e-179; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009896 | positive regulation of catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.08; coverage=63.439; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010508 | positive regulation of autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030163 | protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031396 | regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031401 | positive regulation of protein modification process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031667 | response to nutrient levels | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.02; coverage=63.529; evalue=1.5e-179; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032446 | protein modification by small protein conjugation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033554 | cellular response to stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034614 | cellular response to reactive oxygen species | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034727 | piecemeal microautophagy of the nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039689 | negative stranded viral RNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042594 | response to starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042752 | regulation of circadian rhythm | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.08; coverage=63.439; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043068 | positive regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045732 | positive regulation of protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046686 | response to cadmium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048511 | rhythmic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.08; coverage=63.439; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050765 | negative regulation of phagocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060255 | regulation of macromolecule metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.08; coverage=63.439; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060284 | regulation of cell development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061024 | membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061684 | chaperone-mediated autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061739 | protein lipidation involved in autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0062099 | negative regulation of programmed necrotic cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070257 | positive regulation of mucus secretion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071315 | cellular response to morphine | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.02; coverage=63.529; evalue=1.5e-179; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071455 | cellular response to hyperoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080090 | regulation of primary metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.08; coverage=63.439; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080144 | intracellular amino acid homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090155 | negative regulation of sphingolipid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090156 | intracellular sphingolipid homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090298 | negative regulation of mitochondrial DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097305 | response to alcohol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.02; coverage=63.529; evalue=1.5e-179; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900056 | negative regulation of leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901526 | positive regulation of mitophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902617 | response to fluoride | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.02; coverage=63.529; evalue=1.5e-179; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903936 | cellular response to sodium arsenite | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000786 | positive regulation of autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000407 | phagophore assembly site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005930 | axoneme | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034774 | secretory granule lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019778 | Atg12 activating enzyme activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019779 | Atg8 activating enzyme activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G45900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.75; coverage=60.814; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:415961 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.08; coverage=63.439; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10533 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.365; coverage=63.439; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:74244 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.877; coverage=63.529; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:312647 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.02; coverage=63.529; evalue=1.5e-179 | UniProtKB/Swiss-Prot DAT 2026 current_release |