Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_026410 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:125943150-125946136 (-) |
| Description | Similar to SEC13B: Protein transport protein SEC13 homolog B (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026410 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 28 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g30050 |
Required for protein transport from the endoplasmic reticulum to the Golgi apparatus. | |
At3g01340 |
Required for protein transport from the endoplasmic reticulum to the Golgi apparatus. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006606 | protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006913 | nucleocytoplasmic transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031669 | cellular response to nutrient levels | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032008 | positive regulation of TOR signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032527 | protein exit from endoplasmic reticulum | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051028 | mRNA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072659 | protein localization to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090110 | COPII-coated vesicle cargo loading | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090114 | COPII-coated vesicle budding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904263 | positive regulation of TORC1 signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000776 | kinetochore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005643 | nuclear pore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030127 | COPII vesicle coat | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031080 | nuclear pore outer ring | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061700 | GATOR2 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005198 | structural molecule activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G30050 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.179; coverage=99.67; evalue=2.25e-166 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G01340 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.517; coverage=99.67; evalue=3.83e-164 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:512530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.362; coverage=98.35; evalue=1.58e-103 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:110379 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.356; coverage=98.35; evalue=1.26e-103 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:297522 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.356; coverage=98.35; evalue=1.3e-103 | UniProtKB/Swiss-Prot DAT 2026 current_release |