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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_026089
Query referenceOH1004
LocationChr05:120751234-120753596 (+)
DescriptionSimilar to PHL11: Myb family transcription factor PHL11 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_026089 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g45580 Myb family transcription factor PHL11. No verified direct reference in this release
At3g24120 Transcriptional activator.
Arabidopsis PHL2 and PHR1 Act Redundantly as the Key Components of the Central Regulatory System Controlling Transcriptional Responses to Phosphate Starvation.2016 · DOI: 10.1104/pp.15.01336
At4g13640 Transcriptional activator.
Arabidopsis PHL2 and PHR1 Act Redundantly as the Key Components of the Central Regulatory System Controlling Transcriptional Responses to Phosphate Starvation.2016 · DOI: 10.1104/pp.15.01336
At1g79430 Transcription factor required for phloem identity. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.923; coverage=91.549; evalue=1.8e-74; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.923; coverage=91.549; evalue=1.8e-74; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009567double fertilization forming a zygote and endospermBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.968; coverage=66.549; evalue=3.31e-58; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009877nodulationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.071; coverage=59.507; evalue=3.74e-50; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.663; coverage=59.507; evalue=1.43e-50; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010088phloem developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.663; coverage=59.507; evalue=1.43e-50; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010089xylem developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.663; coverage=59.507; evalue=1.43e-50; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010468regulation of gene expressionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.723; coverage=66.197; evalue=3.17e-58; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010628positive regulation of gene expressionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.723; coverage=66.197; evalue=3.17e-58; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016036cellular response to phosphate starvationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.723; coverage=66.197; evalue=3.17e-58; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045893positive regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.663; coverage=59.507; evalue=1.43e-50; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000762regulation of phenylpropanoid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.923; coverage=91.549; evalue=1.8e-74; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.923; coverage=91.549; evalue=1.8e-74; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.663; coverage=59.507; evalue=1.43e-50; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.723; coverage=66.197; evalue=3.17e-58; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.923; coverage=91.549; evalue=1.8e-74; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.923; coverage=91.549; evalue=1.8e-74; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043565sequence-specific DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.723; coverage=66.197; evalue=3.17e-58; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G79430KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.663; coverage=59.507; evalue=1.43e-50UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G24120KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.723; coverage=66.197; evalue=3.17e-58UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G13640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.968; coverage=66.549; evalue=3.31e-58UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G45580KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.923; coverage=91.549; evalue=1.8e-74UniProtKB/Swiss-Prot DAT 2026 current_release