Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_025838 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:117485637-117487660 (-) |
| Description | Similar to BOI: E3 ubiquitin-protein ligase BOI (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025838 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 51 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g19700 |
E3 ubiquitin-protein ligase involved in the regulation of pathogen and abiotic stress responses by facilitating degradation of MYB108/BOI. | No verified direct reference in this release |
At3g12920 |
Probable E3 ubiquitin-protein ligase. | |
At5g45100 |
E3 ubiquitin-protein ligase involved in regulation of abiotic stress responses. | |
At1g79110 |
Probable E3 ubiquitin-protein ligase. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000209 | protein polyubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001666 | response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.0; coverage=60.87; evalue=1.04e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007166 | cell surface receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007249 | canonical NF-kappaB signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031398 | positive regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033209 | tumor necrosis factor-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034121 | regulation of toll-like receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0038061 | non-canonical NF-kappaB signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039535 | regulation of RIG-I signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042127 | regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043067 | regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043069 | negative regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045088 | regulation of innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045471 | response to ethanol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045595 | regulation of cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051591 | response to cAMP | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051726 | regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060544 | regulation of necroptotic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060546 | negative regulation of necroptotic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070266 | necroptotic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070424 | regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902523 | positive regulation of protein K63-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902524 | positive regulation of protein K48-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902527 | positive regulation of protein monoubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904975 | response to bleomycin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001741 | XY body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009898 | cytoplasmic side of plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035631 | CD40 receptor complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004869 | cysteine-type endopeptidase inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016740 | transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=EXP:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043130 | ubiquitin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051087 | protein-folding chaperone binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098770 | FBXO family protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06; UniProt GO evidence=IPI:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G79110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.926; coverage=70.145; evalue=7.96e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G12920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.0; coverage=60.87; evalue=1.04e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G19700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=31.111; coverage=78.261; evalue=1.79e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G45100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.481; coverage=62.609; evalue=1.98e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:329 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=47.917; coverage=13.913; evalue=2.22e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |