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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_025745
Query referenceOH1004
LocationChr05:116359355-116360734 (+)
DescriptionSimilar to LA1: Protein LAZY 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_025745 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 6 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g14090 Involved in the regulation of shoot gravitropism.
AtLAZY1 is a signaling component required for gravitropism of the Arabidopsis thaliana inflorescence.2013 · DOI: 10.1111/tpj.12118
Strigolactones regulate rice tiller angle by attenuating shoot gravitropism through inhibiting auxin biosynthesis.2014 · DOI: 10.1073/pnas.1411859111
The Arabidopsis LAZY1 Family Plays a Key Role in Gravity Signaling within Statocytes and in Branch Angle Control of Roots and Shoots.2017 · DOI: 10.1105/tpc.16.00575
LAZY Genes Mediate the Effects of Gravity on Auxin Gradients and Plant Architecture.2017 · DOI: 10.1104/pp.17.00942

Rice

Reference gene IDPossible functionPapers / DOI
Os11g0490600 Involved in the regulation of shoot gravitropism and tiller angle through negative regulation of basipetal polar auxin transport (PAT). No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009630gravitropismBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.269; coverage=123.77; evalue=4.97e-19; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009958positive gravitropismBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.676; coverage=101.093; evalue=7.3e-43; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009959negative gravitropismBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.676; coverage=101.093; evalue=7.3e-43; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000012regulation of auxin polar transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.676; coverage=101.093; evalue=7.3e-43; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.676; coverage=101.093; evalue=7.3e-43; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.676; coverage=101.093; evalue=7.3e-43; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G14090KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.676; coverage=101.093; evalue=7.3e-43UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os11g0490600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.523; coverage=130.601; evalue=2.58e-16UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGzma:100193776KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.269; coverage=123.77; evalue=4.97e-19UniProtKB/Swiss-Prot DAT 2026 current_release