Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_025678`
Query reference	OH1004
Location	Chr05:115170756-115175569 (+)
Description	Similar to AGD2: ADP-ribosylation factor GTPase-activating protein AGD2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_025678 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 25 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g60860`	Probable GTPase-activating protein.	No verified direct reference in this release
`At1g10870`	Probable GTPase-activating protein.	No verified direct reference in this release
`At5g13300`	GTPase-activating protein (GAP) for ADP ribosylation factor (ARF).	A series of novel mutants of Arabidopsis thaliana that are defective in the formation of continuous vascular network: calling the auxin signal flow canalization hypothesis into question.2000 · DOI: 10.1242/dev.127.15.3197 VAN3 ARF-GAP-mediated vesicle transport is involved in leaf vascular network formation.2005 · DOI: 10.1242/dev.01716
`At5g61980`	Probable GTPase-activating protein (By similarity).	A class I ADP-ribosylation factor GTPase-activating protein is critical for maintaining directional root hair growth in Arabidopsis.2008 · DOI: 10.1104/pp.108.119529

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006897	endocytosis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007010	cytoskeleton organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.587; coverage=103.313; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009733	response to auxin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009965	leaf morphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010051	xylem and phloem pattern formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010087	phloem or xylem histogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030029	actin filament-based process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.79; coverage=99.387; evalue=1.37e-64; UniProt GO evidence=ISO:RGD	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032456	endocytic recycling	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.79; coverage=99.387; evalue=1.37e-64; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048768	root hair cell tip growth	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.587; coverage=103.313; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990090	cellular response to nerve growth factor stimulus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.79; coverage=99.387; evalue=1.37e-64; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0001726	ruffle	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.79; coverage=99.387; evalue=1.37e-64; UniProt GO evidence=ISO:RGD	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.734; coverage=96.933; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.108; coverage=96.319; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005768	endosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.587; coverage=103.313; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005794	Golgi apparatus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010008	endosome membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.79; coverage=99.387; evalue=1.37e-64; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030139	endocytic vesicle	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.587; coverage=103.313; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030140	trans-Golgi network transport vesicle	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035618	root hair	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.587; coverage=103.313; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005096	GTPase activator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.108; coverage=96.319; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.108; coverage=96.319; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031267	small GTPase binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.79; coverage=99.387; evalue=1.37e-64; UniProt GO evidence=ISO:RGD	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035091	phosphatidylinositol binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.79; coverage=99.387; evalue=1.37e-64; UniProt GO evidence=ISO:RGD	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G10870	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.734; coverage=96.933; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G60860	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.108; coverage=96.319; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G13300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.579; coverage=101.35; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G61980	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.587; coverage=103.313; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	rno:619382	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.79; coverage=99.387; evalue=1.37e-64	UniProtKB/Swiss-Prot DAT 2026 current_release