Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_025401 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:111101798-111105702 (+) |
| Description | Similar to SH3P2: SH3 domain-containing protein 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025401 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 37 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g34660 |
May regulate autophagosome formation or maturation. | |
At4g18060 |
May be involved in the recruitment of DRP2A to the accessory protein complex and in the negative regulation of its GTPase activity. | No verified direct reference in this release |
At1g31440 |
Lipid binding protein bound strongly to phosphatidic acid, phosphatidylinositol-4-phosphate and phosphatidylinositol-4,5- bisphosphate. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006897 | endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.854; coverage=50.122; evalue=6.94e-09; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009920 | cell plate formation involved in plant-type cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061024 | membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.854; coverage=50.122; evalue=6.94e-09; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072319 | vesicle uncoating | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.366; coverage=50.122; evalue=3.17e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072583 | clathrin-dependent endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903527 | positive regulation of membrane tubulation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000421 | autophagosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002102 | podosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.854; coverage=50.122; evalue=6.94e-09; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005776 | autophagosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.864; coverage=107.579; evalue=4.19e-109; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.864; coverage=107.579; evalue=4.19e-109; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009504 | cell plate | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.864; coverage=107.579; evalue=4.19e-109; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.854; coverage=50.122; evalue=6.94e-09; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030136 | clathrin-coated vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.854; coverage=50.122; evalue=6.94e-09; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090406 | pollen tube | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.854; coverage=50.122; evalue=6.94e-09; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017124 | SH3 domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.366; coverage=50.122; evalue=3.17e-08; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019902 | phosphatase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.366; coverage=50.122; evalue=3.17e-08; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030276 | clathrin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.864; coverage=107.579; evalue=4.19e-109; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031697 | beta-1 adrenergic receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.366; coverage=50.122; evalue=3.17e-08; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032266 | phosphatidylinositol-3-phosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.366; coverage=50.122; evalue=3.17e-08; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043130 | ubiquitin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044325 | transmembrane transporter binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.366; coverage=50.122; evalue=3.17e-08; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051020 | GTPase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.366; coverage=50.122; evalue=3.17e-08; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G31440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.864; coverage=107.579; evalue=4.19e-109 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G18060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.541; coverage=90.465; evalue=1.66e-126 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G34660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.241; coverage=91.198; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:395202 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.854; coverage=50.122; evalue=6.94e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:20405 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.366; coverage=50.122; evalue=3.17e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |