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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_024709
Query referenceOH1004
LocationChr05:97221209-97223908 (+)
DescriptionSimilar to DTX45: Protein DETOXIFICATION 45%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_024709 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 19 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g38380 Protein DETOXIFICATION 45, chloroplastic. No verified direct reference in this release
At2g38330 Protein DETOXIFICATION 44, chloroplastic. No verified direct reference in this release
At1g51340 Citrate transporter critical for aluminum tolerance.
Aluminum-activated citrate and malate transporters from the MATE and ALMT families function independently to confer Arabidopsis aluminum tolerance.2009 · DOI: 10.1111/j.1365-313x.2008.03696.x
A promoter-swap strategy between the AtALMT and AtMATE genes increased Arabidopsis aluminum resistance and improved carbon-use efficiency for aluminum resistance.2012 · DOI: 10.1111/j.1365-313x.2012.04994.x
At3g08040 Citrate transporter responsible for loading citrate into xylem tissues, which helps facilitate iron transport to shoots.
FRD3, a member of the multidrug and toxin efflux family, controls iron deficiency responses in Arabidopsis.2002 · DOI: 10.1105/tpc.001495
FRD3 controls iron localization in Arabidopsis.2004 · DOI: 10.1104/pp.104.045633
The FRD3-mediated efflux of citrate into the root vasculature is necessary for efficient iron translocation.2007 · DOI: 10.1104/pp.107.097162
The FRD3 citrate effluxer promotes iron nutrition between symplastically disconnected tissues throughout Arabidopsis development.2011 · DOI: 10.1105/tpc.111.088088
At2g21340 Protein DETOXIFICATION 46, chloroplastic. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006879intracellular iron ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.741; coverage=81.947; evalue=5.36e-110; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009737response to abscisic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.741; coverage=81.947; evalue=5.36e-110; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010044response to aluminum ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.756; coverage=82.655; evalue=1.27e-117; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015746citrate transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.756; coverage=82.655; evalue=1.27e-117; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016036cellular response to phosphate starvationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.741; coverage=81.947; evalue=5.36e-110; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030001metal ion transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.741; coverage=81.947; evalue=5.36e-110; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034220monoatomic ion transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.756; coverage=82.655; evalue=1.27e-117; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060586multicellular organismal-level iron ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.741; coverage=81.947; evalue=5.36e-110; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.756; coverage=82.655; evalue=1.27e-117; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.702; coverage=83.186; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.008; coverage=93.628; evalue=4.84e-17; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031969chloroplast membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.702; coverage=83.186; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035618root hairCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.756; coverage=82.655; evalue=1.27e-117; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005381iron ion transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.741; coverage=81.947; evalue=5.36e-110; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015137citrate transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.756; coverage=82.655; evalue=1.27e-117; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015297antiporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.702; coverage=83.186; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0022857transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.702; coverage=83.186; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042910xenobiotic transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.702; coverage=83.186; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046873metal ion transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.741; coverage=81.947; evalue=5.36e-110; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G51340KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.756; coverage=82.655; evalue=1.27e-117UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G21340KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=24.008; coverage=93.628; evalue=4.84e-17UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G38330KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.302; coverage=76.106; evalue=1.91e-145UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G08040KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.741; coverage=81.947; evalue=5.36e-110UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G38380KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.702; coverage=83.186; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release