Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_024367 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:88572524-88576908 (-) |
| Description | Similar to EB1C: Microtubule-associated protein RP/EB family member 1C (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_024367 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 37 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g67270 |
Plant-specific EB1 subtype that functions preferentially at early stages of plant mitosis by regulating spindle positioning and chromosome segregation. | |
At2g47170 |
GTP-binding protein involved in protein trafficking. | |
At1g70490 |
GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus. | No verified direct reference in this release |
At1g23490 |
GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009652 | thigmotropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=86.74; coverage=34.674; evalue=2.33e-115; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030865 | cortical cytoskeleton organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031001 | response to brefeldin A | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031110 | regulation of microtubule polymerization or depolymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035372 | protein localization to microtubule | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051225 | spindle assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090354 | regulation of auxin metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098876 | vesicle-mediated transport to the plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=86.74; coverage=34.674; evalue=3.23e-115; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=86.74; coverage=34.674; evalue=3.23e-115; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005802 | trans-Golgi network | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005815 | microtubule organizing center | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005881 | cytoplasmic microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=86.74; coverage=34.674; evalue=3.23e-115; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009524 | phragmoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035371 | microtubule plus-end | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051233 | spindle midzone | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003924 | GTPase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=86.74; coverage=34.674; evalue=3.23e-115; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003925 | G protein activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005525 | GTP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016004 | phospholipase activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051010 | microtubule plus-end binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G23490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=86.74; coverage=34.674; evalue=3.23e-115 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G70490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=86.74; coverage=34.674; evalue=3.23e-115 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G47170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.74; coverage=34.674; evalue=1.61e-115 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G67270 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.575; coverage=70.69; evalue=3.14e-119 | UniProtKB/Swiss-Prot DAT 2026 current_release |