Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_024269 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:86245388-86247080 (+) |
| Description | Similar to Os03g0767500: Thioredoxin-like protein HCF164%2C chloroplastic (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_024269 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 9 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g37200 |
Thiol-disulfide oxidoreductase that participates in various redox reactions in the chloroplast. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0767500 |
Probable thiol-disulfide oxidoreductase that may participate in various redox reactions in the chloroplast. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0010190 | cytochrome b6f complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.429; coverage=81.579; evalue=6.94e-109; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.043; coverage=35.338; evalue=1.13e-12; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.044; coverage=84.962; evalue=4.03e-105; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.044; coverage=84.962; evalue=4.03e-105; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009534 | chloroplast thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.044; coverage=84.962; evalue=4.03e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.429; coverage=81.579; evalue=6.94e-109; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031977 | thylakoid lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.429; coverage=81.579; evalue=6.94e-109; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015035 | protein-disulfide reductase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.043; coverage=35.338; evalue=1.13e-12; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.429; coverage=81.579; evalue=6.94e-109; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G37200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.044; coverage=84.962; evalue=4.03e-105 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0767500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.429; coverage=81.579; evalue=6.94e-109 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syf:Synpcc7942_1830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.043; coverage=35.338; evalue=1.13e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syf:Synpcc7942_2128 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.606; coverage=51.504; evalue=4.99e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:sll1980 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.728; coverage=65.038; evalue=1.31e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release |