Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_023852 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:71184488-71187192 (-) |
| Description | Similar to HEXO3: Beta-hexosaminidase 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_023852 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 35 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g65590 |
Has a broad substrate specificity. |
Biosynthesis of truncated N-linked oligosaccharides results from non-orthologous hexosaminidase-mediated mechanisms in nematodes, plants, and insects.2007 · DOI: 10.1074/jbc.m704235200
|
At3g55260 |
Has a broad substrate specificity. |
Biosynthesis of truncated N-linked oligosaccharides results from non-orthologous hexosaminidase-mediated mechanisms in nematodes, plants, and insects.2007 · DOI: 10.1074/jbc.m704235200
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0005975 | carbohydrate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006044 | N-acetylglucosamine metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006491 | N-glycan processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006689 | ganglioside catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007338 | single fertilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008360 | regulation of cell shape | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030203 | glycosaminoglycan metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030207 | chondroitin sulfate proteoglycan catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030209 | dermatan sulfate proteoglycan catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030214 | hyaluronan catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.108; coverage=65.487; evalue=4.17e-18; UniProt GO evidence=HDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.722; coverage=124.336; evalue=9.27e-50; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001669 | acrosomal vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005764 | lysosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.108; coverage=65.487; evalue=4.17e-18; UniProt GO evidence=IDA:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.722; coverage=124.336; evalue=9.27e-50; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.722; coverage=124.336; evalue=9.27e-50; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035578 | azurophil granule lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042582 | azurophil granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043202 | lysosomal lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099503 | secretory vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.722; coverage=124.336; evalue=9.27e-50; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905379 | beta-N-acetylhexosaminidase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004563 | beta-N-acetylhexosaminidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008375 | acetylglucosaminyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015929 | hexosaminidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016231 | beta-N-acetylglucosaminidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030246 | carbohydrate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G65590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.921; coverage=123.009; evalue=1.84e-78 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G55260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.722; coverage=124.336; evalue=9.27e-50 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0282539 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.965; coverage=50.442; evalue=4.29e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0287033 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.108; coverage=65.487; evalue=4.17e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:3074 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.275; coverage=120.796; evalue=1.03e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release |